CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TBX18
(
Macaca mulatta
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSMMUG00000010599
T340087_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TBX18
M05797_2.00
Homo sapiens
DDAGGTGTGARV
BYTCACACCTHH
SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX
0.920
1.000
TBX18
M11380_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX18_01
0.920
1.000
TBX18
M05798_2.00
Homo sapiens
NDAGGYGTGAAN
NTTCACRCCTHN
SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX
0.920
1.000
TBX15
M03554_2.00
Homo sapiens
AGGTGTGAAATTCACACCT
AGGTGTGAATTTCACACCT
SELEX
Jolma et al.(2013)
TBX15_1
0.901
0.929
TBX15
M03555_2.00
Homo sapiens
AGGTGTGA
TCACACCT
SELEX
Jolma et al.(2013)
TBX15_2
0.901
0.929
TBX15
M05795_2.00
Homo sapiens
NRSGTGTBAN
NTVACACSYN
SELEX
Yin et al.(2017)
TBX15_eDBD_HT-SELEX
0.901
0.929
TBX15
M11378_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX15_01
0.901
0.929
TBX15
M11379_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX15_02
0.901
0.929
TBX15
M05796_2.00
Homo sapiens
NDSGYGTBAN
NTVACRCSHN
SELEX
Yin et al.(2017)
TBX15_eDBD_Methyl-HT-SELEX
0.901
0.929
TBX22
M11383_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX22_01
0.830
0.742
mid
M03994_2.00
Drosophila melanogaster
DAGGTGTKAN
NTMACACCTH
SELEX
Nitta et al.(2015)
mid_1
0.776
0.604
Tbx20
M00835_2.00
Mus musculus
NRRGTGTBAN
NTVACACYYN
PBM
Weirauch et al.(2013)
pTH3777
0.752
0.659
TBX20
M03565_2.00
Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT
SELEX
Jolma et al.(2013)
TBX20_1
0.752
0.659
TBX20
M03566_2.00
Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT
SELEX
Jolma et al.(2013)
TBX20_2
0.752
0.659
TBX20
M03567_2.00
Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN
SELEX
Jolma et al.(2013)
TBX20_3
0.752
0.659
TBX20
M03568_2.00
Homo sapiens
DAGGTGTGAWR
YWTCACACCTH
SELEX
Jolma et al.(2013)
TBX20_4
0.752
0.659
TBX20
M03569_2.00
Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT
SELEX
Jolma et al.(2013)
TBX20_5
0.752
0.659
TBX20
M05813_2.00
Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1
0.752
0.659
TBX20
M05814_2.00
Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2
0.752
0.659
TBX20
M05817_2.00
Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1
0.752
0.659
TBX20
M05818_2.00
Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2
0.752
0.659
Tbx20
M09430_2.00
Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN
Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C
0.752
0.659
Tbx20
M09650_2.00
Mus musculus
SCTGTCADCASN
NSTGHTGACAGS
Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636
0.752
0.659
TBX20
M11385_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX20_05
0.752
0.659
TBX20
M05815_2.00
Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1
0.752
0.659
TBX20
M05816_2.00
Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2
0.752
0.659
TBX20
M05819_2.00
Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1
0.752
0.659
TBX20
M05820_2.00
Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2
0.752
0.659
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000013895
T-box
52
241
VDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVISFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPETVFTTVTAYQNQQITRLKIDRNPFAKGFRD
ENSMMUP00000013896
T-box
141
330
VDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISGLDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVISFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPETVFTTVTAYQNQQITRLKIDRNPFAKGFRD
Links
Other
T-box
family TFs
Other
Macaca mulatta
TFs
264 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000017605
Ailuropoda melanoleuca
ENSAMEG00000017605
I
POU4F3
Bos taurus
ENSBTAG00000018817
I
POU4F3
Canis familiaris
ENSCAFG00000006473
I
POU4F3
Callithrix jacchus
ENSCJAG00000021307
I
POU4F3
Cavia porcellus
ENSCPOG00000025610
I
ENSCSAG00000012256
Chlorocebus sabaeus
ENSCSAG00000012256
I
POU4F3
Dasypus novemcinctus
ENSDNOG00000045606
I
Pou4f3
Dipodomys ordii
ENSDORG00000002965
I
POU4F3
Equus caballus
ENSECAG00000018410
I
POU4F3
Erinaceus europaeus
ENSEEUG00000012660
I
POU4F3
Echinops telfairi
ENSETEG00000006520
I
POU4F3
Felis catus
ENSFCAG00000030722
I
POU4F3
Homo sapiens
ENSG00000091010
D
POU4F3
Gorilla gorilla
ENSGGOG00000012435
I
ENSLACG00000008349
Latimeria chalumnae
ENSLACG00000008349
I
POU4F3
Loxodonta africana
ENSLAFG00000006932
I
ENSMEUG00000009050
Macropus eugenii
ENSMEUG00000009050
I
ENSMICG00000003274
Microcebus murinus
ENSMICG00000003274
I
ENSMMUG00000022320
Macaca mulatta
ENSMMUG00000022320
I
POU4F3
Monodelphis domestica
ENSMODG00000010137
I
ENSMPUG00000007828
Mustela putorius furo
ENSMPUG00000007828
I
Pou4f3
Mus musculus
ENSMUSG00000024497
D
ENSNLEG00000009898
Nomascus leucogenys
ENSNLEG00000009898
I
ENSOARG00000003067
Ovis aries
ENSOARG00000003067
I
ENSOCUG00000022425
Oryctolagus cuniculus
ENSOCUG00000022425
I
POU4F3
Otolemur garnettii
ENSOGAG00000026756
I
ENSP00000230732
Macaca fascicularis
ENSP00000230732
I
ENSP00000230732-D1
Bos grunniens
ENSP00000230732-D1
I
ENSPANG00000008306
Papio anubis
ENSPANG00000008306
I
ENSPFOG00000003289
Poecilia formosa
ENSPFOG00000003289
I
ENSPPYG00000015910
Pongo abelii
ENSPPYG00000015910
I
ENSPSIG00000016096
Pelodiscus sinensis
ENSPSIG00000016096
I
POU4F3
Pan troglodytes
ENSPTRG00000017374
I
POU4F3
Pteropus vampyrus
ENSPVAG00000005224
I
Pou4f3
Rattus norvegicus
ENSRNOG00000018842
I
ENSSHAG00000008089
Sarcophilus harrisii
ENSSHAG00000008089
I
POU4F3
Sus scrofa
ENSSSCG00000014412
I
ENSSTOG00000021302
Ictidomys tridecemlineatus
ENSSTOG00000021302
I
POU4F3
Tupaia belangeri
ENSTBEG00000014805
I
POU4F3
Tursiops truncatus
ENSTTRG00000000937
I
ENSXMAG00000001410
Xiphophorus maculatus
ENSXMAG00000001410
I
Myotis_brandtii_POU4F3_10017427
Myotis brandtii
Myotis_brandtii_POU4F3_10017427
I