ENSONIG00000017642 (Oreochromis niloticus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSONIG00000017642 T340254_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TBX22
M11383_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX22_01 		0.834 0.841
TBX18
M05797_2.00 		Homo sapiens
DDAGGTGTGARV
BYTCACACCTHH		 SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX 		0.824 0.742
TBX18
M11380_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX18_01 		0.824 0.742
TBX18
M05798_2.00 		Homo sapiens
NDAGGYGTGAAN
NTTCACRCCTHN		 SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX 		0.824 0.742
TBX15
M03554_2.00 		Homo sapiens
AGGTGTGAAATTCACACCT
AGGTGTGAATTTCACACCT		 SELEX
Jolma et al.(2013)
TBX15_1 		0.805 0.714
TBX15
M03555_2.00 		Homo sapiens
AGGTGTGA
TCACACCT		 SELEX
Jolma et al.(2013)
TBX15_2 		0.805 0.714
TBX15
M05795_2.00 		Homo sapiens
NRSGTGTBAN
NTVACACSYN		 SELEX
Yin et al.(2017)
TBX15_eDBD_HT-SELEX 		0.805 0.714
TBX15
M11378_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_01 		0.805 0.714
TBX15
M11379_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_02 		0.805 0.714
TBX15
M05796_2.00 		Homo sapiens
NDSGYGTBAN
NTVACRCSHN		 SELEX
Yin et al.(2017)
TBX15_eDBD_Methyl-HT-SELEX 		0.805 0.714
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.742 0.615
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.742 0.615
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.742 0.615
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.742 0.615
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.742 0.615
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.742 0.615
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.742 0.615
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.742 0.615
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.742 0.615
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.742 0.615
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.742 0.615
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.742 0.615
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.742 0.615
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.742 0.615
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.742 0.615
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.742 0.615
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.742 0.615
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000022248 T-box 107 296

Links

Other T-box family TFs
Other Oreochromis niloticus TFs

214 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29813.m001501 Ricinus communis 29813.m001501 I
29904.m002952 Ricinus communis 29904.m002952 I
29950.m001149 Ricinus communis 29950.m001149 I
AC155434.2_FG005 Zea mays AC155434.2_FG005 I
AC233960.1_FG003 Zea mays AC233960.1_FG003 I
AC234155.1_FG002 Zea mays AC234155.1_FG002 I
Al_scaffold_0003_352 Arabidopsis lyrata Al_scaffold_0003_352 I
UNE16 Arabidopsis lyrata Al_scaffold_0007_2992 I
AMTR_s00089p00057120 Amborella trichopoda AMTR_s00089p00057120 I
AMTR_s00094p00028710 Amborella trichopoda AMTR_s00094p00028710 I
AMTR_s00119p00095480 Amborella trichopoda AMTR_s00119p00095480 I
Aquca_034_00135 Aquilegia coerulea Aquca_034_00135 I
Aquca_072_00114 Aquilegia coerulea Aquca_072_00114 I
APL Arabidopsis thaliana AT1G79430 I
MYR2 Arabidopsis thaliana AT3G04030 D
AT3G24120 Arabidopsis thaliana AT3G24120 D
UNE16 Arabidopsis thaliana AT4G13640 D
MYR1 Arabidopsis thaliana AT5G18240 D
BGIOSGA012541 Oryza indica BGIOSGA012541 I
BGIOSGA017828 Oryza indica BGIOSGA017828 I
BGIOSGA023423 Oryza indica BGIOSGA023423 I
BGIOSGA023696 Oryza indica BGIOSGA023696 I
Bo1g153240 Brassica oleracea Bo1g153240 I
Bo9g157350 Brassica oleracea Bo9g157350 I
Bostr.2570s0305 Boechera stricta Bostr.2570s0305 I
Bostr.26527s0384 Boechera stricta Bostr.26527s0384 I
Bra002145 Brassica rapa Bra002145 I
Bra031952 Brassica rapa Bra031952 I
Bra036412 Brassica rapa Bra036412 I
BRADI1G17400 Brachypodium distachyon BRADI1G17400 I
BRADI1G63690 Brachypodium distachyon BRADI1G63690 I
BRADI2G21880 Brachypodium distachyon BRADI2G21880 I
Cagra.0906s0019 Capsella grandiflora Cagra.0906s0019 I
Cagra.2026s0004 Capsella grandiflora Cagra.2026s0004 I
Carubv10001129m.g Capsella rubella Carubv10001129m.g I
Carubv10013932m.g Capsella rubella Carubv10013932m.g I
cassava11796.valid.m1 Manihot esculenta cassava11796.valid.m1 I
cassava13078.valid.m1 Manihot esculenta cassava13078.valid.m1 I
cassava22618.valid.m1 Manihot esculenta cassava22618.valid.m1 I
cassava24344.valid.m1 Manihot esculenta cassava24344.valid.m1 I
cassava24345.valid.m1 Manihot esculenta cassava24345.valid.m1 I
cassava27734.m1 Manihot esculenta cassava27734.m1 I
cassava35679.valid.m1 Manihot esculenta cassava35679.valid.m1 I
Ca_07058 Cicer arietinum Ca_07058 I
Ca_16371 Cicer arietinum Ca_16371 I
Ca_18077 Cicer arietinum Ca_18077 I
Ca_19147 Cicer arietinum Ca_19147 I
Ca_25975 Cicer arietinum Ca_25975 I
chr2.CM0641.500.nc Lotus japonicus chr2.CM0641.500.nc I
Ciclev10020171m.g Citrus clementina Ciclev10020171m.g I
Ciclev10031937m.g Citrus clementina Ciclev10031937m.g I
Cla021740 Citrullus lanatus Cla021740 I
Cucsa.256450 Cucumis sativus Cucsa.256450 I
Cucsa.340600 Cucumis sativus Cucsa.340600 I
estExt_Genewise1.C_2010083 Physcomitrella patens estExt_Genewise1.C_2010083 I
Eucgr.A02082 Eucalyptus grandis Eucgr.A02082 I
Eucgr.G02494 Eucalyptus grandis Eucgr.G02494 I
Eucgr.K01476 Eucalyptus grandis Eucgr.K01476 I
evm.TU.supercontig_785.2 Carica papaya evm.TU.supercontig_785.2 I
F775_02978 Aegilops tauschii F775_02978 I
F775_13717 Aegilops tauschii F775_13717 I
fgenesh1_pg.scaffold_27000005 Physcomitrella patens fgenesh1_pg.scaffold_27000005 I
MYR1 Arabidopsis lyrata fgenesh2_kg.6__1830__AT5G18240.4 I
gene09780-v1.0-hybrid Fragaria vesca gene09780-v1.0-hybrid I
gene21073-v1.0-hybrid Fragaria vesca gene21073-v1.0-hybrid I
GLYMA01G05920 Glycine max GLYMA01G05920 I
GLYMA02G07790 Glycine max GLYMA02G07790 I
GLYMA02G12070 Glycine max GLYMA02G12070 I
GLYMA07G35700 Glycine max GLYMA07G35700 I
GLYMA11G18990 Glycine max GLYMA11G18990 I
GLYMA12G09490 Glycine max GLYMA12G09490 I
GLYMA12G31020 Glycine max GLYMA12G31020 I
GLYMA13G39290 Glycine max GLYMA13G39290 I
GLYMA16G26820 Glycine max GLYMA16G26820 I
GLYMA20G04630 Glycine max GLYMA20G04630 I
Gorai.004G244800 Gossypium raimondii Gorai.004G244800 I
Gorai.005G033900 Gossypium raimondii Gorai.005G033900 I
Gorai.005G141900 Gossypium raimondii Gorai.005G141900 I
Gorai.006G222400 Gossypium raimondii Gorai.006G222400 I
Gorai.007G287500 Gossypium raimondii Gorai.007G287500 I
Gorai.011G158500 Gossypium raimondii Gorai.011G158500 I
Gorai.012G187000 Gossypium raimondii Gorai.012G187000 I
Gorai.013G086300 Gossypium raimondii Gorai.013G086300 I
Gorai.013G122900 Gossypium raimondii Gorai.013G122900 I
GRMZM2G009060 Zea mays GRMZM2G009060 I
GRMZM2G081671 Zea mays GRMZM2G081671 I
GRMZM2G701218 Zea mays GRMZM2G701218 I
GSMUA_Achr2G01180_001 Musa acuminata GSMUA_Achr2G01180_001 I
GSMUA_Achr5G07670_001 Musa acuminata GSMUA_Achr5G07670_001 I
GSMUA_Achr6G32220_001 Musa acuminata GSMUA_Achr6G32220_001 I
GSMUA_Achr8G21520_001 Musa acuminata GSMUA_Achr8G21520_001 I
gw1.12.332.1 Physcomitrella patens gw1.12.332.1 I
gw1.37.249.1 Physcomitrella patens gw1.37.249.1 I
gw1.47.44.1 Physcomitrella patens gw1.47.44.1 I
LPERR03G13840 Leersia perrieri LPERR03G13840 I
LPERR05G16760 Leersia perrieri LPERR05G16760 I
LPERR07G23540 Leersia perrieri LPERR07G23540 I
Lus10002629.g Linum usitatissimum Lus10002629.g I
Lus10007132.g Linum usitatissimum Lus10007132.g I
Lus10016676.g Linum usitatissimum Lus10016676.g I
Lus10020264.g Linum usitatissimum Lus10020264.g I
MDP0000187636 Malus domestica MDP0000187636 I
MDP0000288143 Malus domestica MDP0000288143 I
MDP0000320628 Malus domestica MDP0000320628 I
MDP0000809773 Malus domestica MDP0000809773 I
mgf008782m Mimulus guttatus mgf008782m I
mgf010580m Mimulus guttatus mgf010580m I
MLOC_52114 Hordeum vulgare MLOC_52114 I
MLOC_52706 Hordeum vulgare MLOC_52706 I
MLOC_63597 Hordeum vulgare MLOC_63597 I
MTR_2g086450 Medicago truncatula MTR_2g086450 I
MTR_4g081710 Medicago truncatula MTR_4g081710 I
MTR_5g041350 Medicago truncatula MTR_5g041350 I
MTR_6g032990 Medicago truncatula MTR_6g032990 I
OB03G25560 Oryza brachyantha OB03G25560 I
OB05G28330 Oryza brachyantha OB05G28330 I
OB07G32210 Oryza brachyantha OB07G32210 I
OBART03G15810 Oryza barthii OBART03G15810 I
OBART05G20920 Oryza barthii OBART05G20920 I
OBART07G26710 Oryza barthii OBART07G26710 I
OGLUM03G15970 Oryza glumaepatula OGLUM03G15970 I
OGLUM05G22140 Oryza glumaepatula OGLUM05G22140 I
OGLUM07G26720 Oryza glumaepatula OGLUM07G26720 I
OLONG_003406 Oryza longistaminata OLONG_003406 I
OLONG_007529 Oryza longistaminata OLONG_007529 I
OMERI05G18910 Oryza meridionalis OMERI05G18910 I
OMERI07G23330 Oryza meridionalis OMERI07G23330 I
ONIVA03G16790 Oryza nivara ONIVA03G16790 I
ONIVA05G21630 Oryza nivara ONIVA05G21630 I
ONIVA07G26450 Oryza nivara ONIVA07G26450 I
OPUNC03G15310 Oryza punctata OPUNC03G15310 I
OPUNC05G18630 Oryza punctata OPUNC05G18630 I
OPUNC07G25120 Oryza punctata OPUNC07G25120 I
orange1.1g013552m.g Citrus sinensis orange1.1g013552m.g I
orange1.1g017978m.g Citrus sinensis orange1.1g017978m.g I
orange1.1g021481m.g Citrus sinensis orange1.1g021481m.g I
ORGLA03G0151400 Oryza glaberrima ORGLA03G0151400 I
ORGLA07G0211200 Oryza glaberrima ORGLA07G0211200 I
ORUFI03G16400 Oryza rufipogon ORUFI03G16400 I
ORUFI05G22210 Oryza rufipogon ORUFI05G22210 I
ORUFI07G27670 Oryza rufipogon ORUFI07G27670 I
OS03G0325500 Oryza sativa OS03G0325500 I
OS05G0488600 Oryza sativa OS05G0488600 I
OS07G0685300 Oryza sativa OS07G0685300 I
Pavir.Ba00251 Panicum virgatum Pavir.Ba00251 I
Pavir.Bb03727 Panicum virgatum Pavir.Bb03727 I
Pavir.Ib01520 Panicum virgatum Pavir.Ib01520 I
Pavir.J02359 Panicum virgatum Pavir.J02359 I
Pavir.J03046 Panicum virgatum Pavir.J03046 I
Pavir.J03485 Panicum virgatum Pavir.J03485 I
Pavir.J24966 Panicum virgatum Pavir.J24966 I
PDK_20s1363211g001 Phoenix dactylifera PDK_20s1363211g001 I
PDK_20s1491101g001 Phoenix dactylifera PDK_20s1491101g001 I
PGSC0003DMG400008401 Solanum tuberosum PGSC0003DMG400008401 I
PGSC0003DMG400018426 Solanum tuberosum PGSC0003DMG400018426 I
PGSC0003DMG400028164 Solanum tuberosum PGSC0003DMG400028164 I
PGSC0003DMG400031299 Solanum tuberosum PGSC0003DMG400031299 I
PK01305.1 Cannabis sativa PK01305.1 I
PK03633.1 Cannabis sativa PK03633.1 I
PK25809.1 Cannabis sativa PK25809.1 I
Pm006487 Prunus mume Pm006487 I
Pm009478 Prunus mume Pm009478 I
Pm025303 Prunus mume Pm025303 I
POPTR_0013s05670 Populus trichocarpa POPTR_0013s05670 I
POPTR_0019s04820 Populus trichocarpa POPTR_0019s04820 I
PRUPE_ppa006561mg Prunus persica PRUPE_ppa006561mg I
PRUPE_ppa015076mg Prunus persica PRUPE_ppa015076mg I
SapurV1A.0058s0610 Salix purpurea SapurV1A.0058s0610 I
SapurV1A.0149s0060 Salix purpurea SapurV1A.0149s0060 I
SapurV1A.0308s0230 Salix purpurea SapurV1A.0308s0230 I
SapurV1A.0462s0100 Salix purpurea SapurV1A.0462s0100 I
SapurV1A.0680s0090 Salix purpurea SapurV1A.0680s0090 I
Sb01g036680 Sorghum bicolor Sb01g036680 I
Sb02g043320 Sorghum bicolor Sb02g043320 I
Sb09g023830 Sorghum bicolor Sb09g023830 I
Sb10g026550 Sorghum bicolor Sb10g026550 I
SELMODRAFT_149357 Selaginella moellendorffii SELMODRAFT_149357 I
SELMODRAFT_155847 Selaginella moellendorffii SELMODRAFT_155847 I
SELMODRAFT_35907 Selaginella moellendorffii SELMODRAFT_35907 I
SELMODRAFT_417629 Selaginella moellendorffii SELMODRAFT_417629 I
Si022265m.g Setaria italica Si022265m.g I
Si030350m.g Setaria italica Si030350m.g I
Si036390m.g Setaria italica Si036390m.g I
Solyc05g007890.2 Solanum lycopersicum Solyc05g007890.2 I
Solyc09g091880.2 Solanum lycopersicum Solyc09g091880.2 I
Solyc10g083340.1 Solanum lycopersicum Solyc10g083340.1 I
Solyc10g085620.1 Solanum lycopersicum Solyc10g085620.1 I
TCM_011693 Theobroma cacao TCM_011693 I
TCM_020332 Theobroma cacao TCM_020332 I
TCM_026448 Theobroma cacao TCM_026448 I
Thhalv10013729m.g Eutrema salsugineum Thhalv10013729m.g I
Thhalv10020861m.g Eutrema salsugineum Thhalv10020861m.g I
Traes_1AL_2CFFBD60E Triticum aestivum Traes_1AL_2CFFBD60E I
Traes_1BL_C0F4A948C Triticum aestivum Traes_1BL_C0F4A948C I
Traes_1DL_7589A1385 Triticum aestivum Traes_1DL_7589A1385 I
Traes_2AS_28B163E7C Triticum aestivum Traes_2AS_28B163E7C I
Traes_2BS_34669CA7B Triticum aestivum Traes_2BS_34669CA7B I
Traes_2DS_8EA143F67 Triticum aestivum Traes_2DS_8EA143F67 I
Traes_4BL_32D8155C6 Triticum aestivum Traes_4BL_32D8155C6 I
TRIUR3_16070 Triticum urartu TRIUR3_16070 I
TRIUR3_19658 Triticum urartu TRIUR3_19658 I
VIT_01s0026g02550 Vitis vinifera VIT_01s0026g02550 I
VIT_05s0029g00060 Vitis vinifera VIT_05s0029g00060 I
VIT_08s0007g07580 Vitis vinifera VIT_08s0007g07580 I