ENSPPYG00000008798 (Pongo abelii)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSPPYG00000008798 T340361_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx2
M00830_2.00 		Mus musculus
NYVDCACBHN
NDVGTGHBRN		 PBM
Weirauch et al.(2013)
pTH3751 		0.795 1.000
TBX2
M03556_2.00 		Homo sapiens
GGTGTKADDWNTVACACB
VGTGTBANWHHTMACACC		 SELEX
Jolma et al.(2013)
TBX2_1 		0.795 1.000
TBX2
M03557_2.00 		Homo sapiens
NAGGTGTBAWN
NWTVACACCTN		 SELEX
Jolma et al.(2013)
TBX2_2 		0.795 1.000
TBX2
M05799_2.00 		Homo sapiens
NNVRCRCNNN
NNNGYGYBNN		 SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX 		0.795 1.000
Tbx2
M08044_2.00 		Mus musculus
GCHYBCTGGGADHTGTAGTYH
DRACTACADHTCCCAGVRDGC		 ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2 		0.795 1.000
TBX2
M11381_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX2_Q2 		0.795 1.000
TBX2
M11382_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX2_Q5 		0.795 1.000
TBX2
M05800_2.00 		Homo sapiens
NNVRCRCBNN
NNVGYGYBNN		 SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX 		0.795 1.000
Tbx3
M00834_2.00 		Mus musculus
NHNDCACNHN
NDNGTGHNDN		 PBM
Weirauch et al.(2013)
pTH3998 		0.781 0.957
TBX3
M05801_2.00 		Homo sapiens
NDSGTGTBRN
NYVACACSHN		 SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX 		0.781 0.957
TBX3
M09426_2.00 		Homo sapiens
DVDGGTGBNAR
YTNVCACCHBH		 Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C 		0.781 0.957
Tbx3
M09429_2.00 		Mus musculus
RRGGTGBBR
YVVCACCYY		 Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B 		0.781 0.957
TBX3
M05802_2.00 		Homo sapiens
DAGGTGTKAN
NTMACACCTH		 SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX 		0.781 0.957
TBX2
M02495_2.00 		Gasterosteus aculeatus
NNVDCACNHN
NDNGTGHBNN		 PBM
Weirauch et al.(2014)
pTH9182 		0.772 0.975
TBX2
M02496_2.00 		Takifugu rubripes
DAGGTGTBRN
NYVACACCTH		 PBM
Weirauch et al.(2014)
pTH9289 		0.772 0.969
XP_008203914.1
M01029_2.00 		Nasonia vitripennis
AGGTGTBA
TVACACCT		 PBM
SebePedros et al.(2013)
pTH9336 		0.748 0.877
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000009878 T-box 1 163

Links

Other T-box family TFs
Other Pongo abelii TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_01134 Aspergillus nidulans CADANIAG00001495 N
COCCADRAFT_5667 Bipolaris zeicola COCCADRAFT_5667 I
COCVIDRAFT_27956 Bipolaris victoriae COCVIDRAFT_27956 I
estExt_Genewise1Plus.C_50594 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_50594 I
F503_06755 Ophiostoma piceae uamh F503_06755 I
fgenesh1_pg.C_scaffold_40000014 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_40000014 I
LEMA_P062270.1 Leptosphaeria maculans LEMA_P062270.1 I
MGG_07777 Magnaporthe oryzae MGG_07777 I
MYCFIDRAFT_170117 Pseudocercospora fijiensis MYCFIDRAFT_170117 I
qa-1F Neurospora crassa NCU06028 D
NEUTE1DRAFT_147986 Neurospora tetrasperma NEUTE1DRAFT_147986 I
PaG_03436 Pseudozyma aphidis PaG_03436 N
PAN0_012d4528 Pseudozyma antarctica PAN0_012d4528 N
Pc16g00930 Penicillium chrysogenum Pc16g00930 N
PCH_Pc16g00930 Penicillium rubens PCH_Pc16g00930 N
PEX1_105370 Penicillium expansum PEX1_105370 N
PFL1_05744 Pseudozyma flocculosa PFL1_05744 N
PHSY_003590 Pseudozyma hubeiensis PHSY_003590 N
PITC_009530 Penicillium italicum PITC_009530 N
PMAA_060820 Penicillium marneffei PMAA_060820 N
PMAA_060820 Talaromyces marneffei PMAA_060820 N
PODANS_5_5100 Podospora anserina PODANS_5_5100 I
PTT_06800 Pyrenophora teres PTT_06800 I
PVAR5_3766 Byssochlamys spectabilis PVAR5_3766 I
SETTUDRAFT_140992 Setosphaeria turcica SETTUDRAFT_140992 I
SMAC_07407 Sordaria macrospora SMAC_07407 I
SPBR_06572 Sporothrix brasiliensis SPBR_06572 I
sr15307 Sporisorium reilianum sr15307 N
U727_00431840181 Penicillium solitum U727_00431840181 N
UM04421 Ustilago maydis UM04421 N