CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

TBX4 *(Tursiops truncatus)* T-box
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00907 (T-box)	IPR001699	ENSTTRG00000004552	T340581_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Tbx4 M00831_2.00	Mus musculus	AGGTGTBA	TVACACCT	PBM Weirauch et al.(2013) pTH3973	0.920	1.000
TBX4 M03558_2.00	Homo sapiens	AGGTGTBA	TVACACCT	SELEX Jolma et al.(2013) TBX4_1	0.920	1.000
TBX4 M03559_2.00	Homo sapiens	AGGTGTBANWWNTVACACBT	AVGTGTBANWWNTVACACCT	SELEX Jolma et al.(2013) TBX4_2	0.920	1.000
Tbx5 M00833_2.00	Mus musculus	AGGTGTBA	TVACACCT	PBM Weirauch et al.(2013) pTH3775	0.899	0.934
TBX5 M03552_2.00	Homo sapiens	AGGTGTBA	TVACACCT	SELEX Jolma et al.(2013) TBX5_1	0.899	0.934
TBX5 M03553_2.00	Homo sapiens	AGGTGTKANWWNTVACACCT	AGGTGTBANWWNTMACACCT	SELEX Jolma et al.(2013) TBX5_2	0.899	0.934
Tbx5 M09649_2.00	Mus musculus	AGGTGHBA	TVDCACCT	Misc Heinz et al.(2010) HL1-Tbx5.biotin_GSE21529	0.899	0.934
TBX5 M11374_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TBX5_01	0.899	0.934
TBX5 M11375_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TBX5_02	0.899	0.934
Tbx5 M11387_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TBX5_05	0.899	0.934
TBX5 M11376_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TBX5_Q2	0.899	0.934
TBX5 M11377_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TBX5_Q5	0.899	0.934
XP_008203914.1 M01029_2.00	Nasonia vitripennis	AGGTGTBA	TVACACCT	PBM SebePedros et al.(2013) pTH9336	0.790	0.624
Tbx2 M00830_2.00	Mus musculus	NYVDCACBHN	NDVGTGHBRN	PBM Weirauch et al.(2013) pTH3751	0.785	0.657
TBX2 M03556_2.00	Homo sapiens	GGTGTKADDWNTVACACB	VGTGTBANWHHTMACACC	SELEX Jolma et al.(2013) TBX2_1	0.785	0.657
TBX2 M03557_2.00	Homo sapiens	NAGGTGTBAWN	NWTVACACCTN	SELEX Jolma et al.(2013) TBX2_2	0.785	0.657
TBX2 M05799_2.00	Homo sapiens	NNVRCRCNNN	NNNGYGYBNN	SELEX Yin et al.(2017) TBX2_eDBD_HT-SELEX	0.785	0.657
Tbx2 M08044_2.00	Mus musculus	GCHYBCTGGGADHTGTAGTYH	DRACTACADHTCCCAGVRDGC	ChIP-seq Chen et al.(2011) SRP001585_Tbx2	0.785	0.657
TBX2 M11381_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TBX2_Q2	0.785	0.657
TBX2 M11382_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TBX2_Q5	0.785	0.657
TBX2 M05800_2.00	Homo sapiens	NNVRCRCBNN	NNVGYGYBNN	SELEX Yin et al.(2017) TBX2_eDBD_Methyl-HT-SELEX	0.785	0.657
Tbx3 M00834_2.00	Mus musculus	NHNDCACNHN	NDNGTGHNDN	PBM Weirauch et al.(2013) pTH3998	0.783	0.641
TBX3 M05801_2.00	Homo sapiens	NDSGTGTBRN	NYVACACSHN	SELEX Yin et al.(2017) TBX3_eDBD_HT-SELEX	0.783	0.641
TBX3 M09426_2.00	Homo sapiens	DVDGGTGBNAR	YTNVCACCHBH	Misc Kulakovskiy et al.(2013) TBX3_HUMAN.H11MO.0.C	0.783	0.641
Tbx3 M09429_2.00	Mus musculus	RRGGTGBBR	YVVCACCYY	Misc Kulakovskiy et al.(2013) TBX3_MOUSE.H11MO.0.B	0.783	0.641
TBX3 M05802_2.00	Homo sapiens	DAGGTGTKAN	NTMACACCTH	SELEX Yin et al.(2017) TBX3_eDBD_Methyl-HT-SELEX	0.783	0.641
estExt_fgenesh2_pg.C_1570024 M01030_2.00	Branchiostoma floridae	NHNDCACNHN	NDNGTGHNDN	PBM SebePedros et al.(2013) pTH9244	0.773	0.674
XP_001195863 M02498_2.00	Strongylocentrotus purpuratus	AGGTGTBA	TVACACCT	PBM Weirauch et al.(2014) pTH9340	0.773	0.669
TBX2 M02495_2.00	Gasterosteus aculeatus	NNVDCACNHN	NDNGTGHBNN	PBM Weirauch et al.(2014) pTH9182	0.752	0.641
TBX2 M02496_2.00	Takifugu rubripes	DAGGTGTBRN	NYVACACCTH	PBM Weirauch et al.(2014) pTH9289	0.752	0.641
Tbx20 M00835_2.00	Mus musculus	NRRGTGTBAN	NTVACACYYN	PBM Weirauch et al.(2013) pTH3777	0.741	0.613
TBX20 M03565_2.00	Homo sapiens	AGGTGTKARVGYGTGA	TCACRCBYTMACACCT	SELEX Jolma et al.(2013) TBX20_1	0.741	0.613
TBX20 M03566_2.00	Homo sapiens	AGGTGTGAAWDTSACACBT	AVGTGTSAHWTTCACACCT	SELEX Jolma et al.(2013) TBX20_2	0.741	0.613
TBX20 M03567_2.00	Homo sapiens	NNNDAGGTGTGAAND	HNTTCACACCTHNNN	SELEX Jolma et al.(2013) TBX20_3	0.741	0.613
TBX20 M03568_2.00	Homo sapiens	DAGGTGTGAWR	YWTCACACCTH	SELEX Jolma et al.(2013) TBX20_4	0.741	0.613
TBX20 M03569_2.00	Homo sapiens	AGGTGTKANGKTGTSA	TSACAMCNTMACACCT	SELEX Jolma et al.(2013) TBX20_5	0.741	0.613
TBX20 M05813_2.00	Homo sapiens	DAGGTGTKARSGTGTGAA	TTCACACSYTMACACCTH	SELEX Yin et al.(2017) TBX20_eDBD_HT-SELEX_1	0.741	0.613
TBX20 M05814_2.00	Homo sapiens	NAGGTGTGAAWTTCACACCTN	NAGGTGTGAAWTTCACACCTN	SELEX Yin et al.(2017) TBX20_eDBD_HT-SELEX_2	0.741	0.613
TBX20 M05817_2.00	Homo sapiens	DRRGTGTBADVGYGTBAN	NTVACRCBHTVACACYYH	SELEX Yin et al.(2017) TBX20_FL_HT-SELEX_1	0.741	0.613
TBX20 M05818_2.00	Homo sapiens	WTCACACYTAGGTGTKAM	KTMACACCTARGTGTGAW	SELEX Yin et al.(2017) TBX20_FL_HT-SELEX_2	0.741	0.613
Tbx20 M09430_2.00	Mus musculus	NDSTGNTGACAGSN	NSCTGTCANCASHN	Misc Kulakovskiy et al.(2013) TBX20_MOUSE.H11MO.0.C	0.741	0.613
Tbx20 M09650_2.00	Mus musculus	SCTGTCADCASN	NSTGHTGACAGS	Misc Heinz et al.(2010) Heart-Tbx20_GSE29636	0.741	0.613
TBX20 M11385_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TBX20_05	0.741	0.613
TBX20 M05815_2.00	Homo sapiens	DAGGTGTKAASGYGTKAA	TTMACRCSTTMACACCTH	SELEX Yin et al.(2017) TBX20_eDBD_Methyl-HT-SELEX_1	0.741	0.613
TBX20 M05816_2.00	Homo sapiens	DASGTGTGAWWWTCACACCTH	DAGGTGTGAWWWTCACACSTH	SELEX Yin et al.(2017) TBX20_eDBD_Methyl-HT-SELEX_2	0.741	0.613
TBX20 M05819_2.00	Homo sapiens	DRGGYGTBARVGYGTKAN	NTMACRCBYTVACRCCYH	SELEX Yin et al.(2017) TBX20_FL_Methyl-HT-SELEX_1	0.741	0.613
TBX20 M05820_2.00	Homo sapiens	TTMACRCCTAVGTGTGAA	TTCACACBTAGGYGTKAA	SELEX Yin et al.(2017) TBX20_FL_Methyl-HT-SELEX_2	0.741	0.613
For this family, TFs with SR scores > 0.734* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSTTRP00000004285	T-box	7	188	VGLHEKELWKKFHEAGTEMIITKGRRMFPSYKVKVTGMNPKTKYILLIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNAFGSKNTAFCTHVFPETSFISVTSYQNHKITQLKIENNPFAKGFRG

Links
Other T-box family TFs
Other *Tursiops truncatus* TFs

337 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AALB008494	Anopheles albimanus	AALB008494	N	0.000
AARA000519	Anopheles arabiensis	AARA000519	N	0.000
AARA011012	Anopheles arabiensis	AARA011012	N	0.000
ACEP16053	Atta cephalotes	ACEP16053	N	0.000
ACEP16062	Atta cephalotes	ACEP16062	N	0.000
ACEP18776	Atta cephalotes	ACEP18776	N	0.000
ACUA015629	Anopheles culicifacies	ACUA015629	N	0.000
ADAC003415	Anopheles darlingi	ADAC003415	N	0.000
ADIR000206	Anopheles dirus	ADIR000206	N	0.000
ADIR010893	Anopheles dirus	ADIR010893	N	0.000
AEPI001840	Anopheles epiroticus	AEPI001840	N	0.000
AEPI001846	Anopheles epiroticus	AEPI001846	N	0.000
AEPI004512	Anopheles epiroticus	AEPI004512	N	0.000
AFAF003029	Anopheles farauti	AFAF003029	N	0.000
AFUN010566	Anopheles funestus	AFUN010566	N	0.000
AGAP011711	Anopheles gambiae	AGAP011711	N	0.000
AMEM003406	Anopheles merus	AMEM003406	N	0.000
AMIN008750	Anopheles minimus	AMIN008750	N	0.000
AQUA000258	Anopheles quadriannulatus	AQUA000258	N	0.000
AQUA010448	Anopheles quadriannulatus	AQUA010448	N	0.000
ASIS022478	Anopheles sinensis	ASIS022478	N	0.000
ASTEI08594	Anopheles stephensi	ASTEI08594	N	0.000
BGIBMGA012897	Bombyx mori	BGIBMGA012897	N	0.000
BGLB004779	Biomphalaria glabrata	BGLB004779	N	0.000
BGLB006532	Biomphalaria glabrata	BGLB006532	N	0.000
DILT_0001817101	Diphyllobothrium latum	DILT_0001817101	N	0.000
ENSACAG00000021966	Anolis carolinensis	ENSACAG00000021966	N	0.000
TBR1	Choloepus hoffmanni	ENSCHOG00000006154	N	0.000
ENSLACG00000004796	Latimeria chalumnae	ENSLACG00000004796	N	0.000
ENSOANG00000030458	Ornithorhynchus anatinus	ENSOANG00000030458	N	0.000
ENSSARG00000001033	Sorex araneus	ENSSARG00000001033	I	0.000
TBX19	Tupaia belangeri	ENSTBEG00000000750	N	0.000
ENSTSYG00000002965	Tarsius syrichta	ENSTSYG00000002965	I	0.000
GG18705	Drosophila erecta	FBgn0110914	N	0.000
GD16690	Drosophila simulans	FBgn0188279	N	0.000
GPUH_0000522701	Gongylonema pulchrum	GPUH_0000522701	N	0.000
GPUH_0000570001	Gongylonema pulchrum	GPUH_0000570001	N	0.000
HelroG92844	Helobdella robusta	HelroG92844	N	0.000
Hsal_09267--XP_394607.3_APIME	Harpegnathos saltator	Hsal_09267--XP_394607.3_APIME	N	0.000
KGM_15499	Danaus plexippus	KGM_15499	N	0.000
L798_14237	Zootermopsis nevadensis	L798_14237	N	0.000
LLOJ003748	Lutzomyia longipalpis	LLOJ003748	N	0.000
nLs.2.1.2.g03987	Litomosoides sigmodontis	nLs.2.1.2.g03987	N	0.000
nOo.2.0.1.g05407	Onchocerca ochengi	nOo.2.0.1.g05407	N	0.000
Ocbimv22001570m.g	Octopus bimaculoides	Ocbimv22001570m.g	N	0.000
PEQ_0000369901	Parascaris equorum	PEQ_0000369901	N	0.000
PPAI002081	Phlebotomus papatasi	PPAI002081	N	0.000
PPAI007558	Phlebotomus papatasi	PPAI007558	N	0.000
PPAI007566	Phlebotomus papatasi	PPAI007566	N	0.000
PXEA_0000565701	Protopolystoma xenopodis	PXEA_0000565701	N	0.000
PXEA_0001168701	Protopolystoma xenopodis	PXEA_0001168701	N	0.000
RPRC007267	Rhodnius prolixus	RPRC007267	N	0.000
SINV10896	Solenopsis invicta	SINV10896	N	0.000
SINV17864	Solenopsis invicta	SINV17864	N	0.000
SINV19991	Solenopsis invicta	SINV19991	N	0.000
SMTD_0001338101	Schistosoma mattheei	SMTD_0001338101	N	0.000
SNAPOd2T00025689001	Oikopleura dioica	SNAPOd2T00025689001	N	0.000
SPER_0003400201	Spirometra erinaceieuropaei	SPER_0003400201	N	0.000
SSLN_0000607001	Schistocephalus solidus	SSLN_0000607001	N	0.000
TRE_0001960401	Trichobilharzia regenti	TRE_0001960401	N	0.000
TsM_000048500	Taenia solium	TsM_000048500	N	0.000
WUBG_08150	Wuchereria bancrofti	WUBG_08150	N	0.000

TBX4 (Tursiops truncatus) T-box

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

337 Related TFs

TBX4 **(Tursiops truncatus)
T-box**