CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GA18721 *(Drosophila pseudoobscura)* T-box
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00907 (T-box)	IPR001699	FBgn0078721	T340636_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Doc2 M03992_2.00	Drosophila melanogaster	DRGGTGTBAN	NTVACACCYH	SELEX Nitta et al.(2015) Doc2_1	0.920	0.989
Doc2 M03993_2.00	Drosophila melanogaster	NAGGTGTBAN	NTVACACCTN	SELEX Nitta et al.(2015) Doc2_2	0.920	0.989
Doc2 M06454_2.00	Drosophila melanogaster	ARGYGTGAA	TTCACRCYT	B1H Zhu et al.(2011) Doc2_SANGER_5_FBgn0035956	0.920	0.989
Doc3 M03990_2.00	Drosophila melanogaster	NRGGTGTBAD	HTVACACCYN	SELEX Nitta et al.(2015) Doc3_1	0.849	0.856
Doc3 M03991_2.00	Drosophila melanogaster	DAGGTGTBAN	NTVACACCTH	SELEX Nitta et al.(2015) Doc3_2	0.849	0.856
For this family, TFs with SR scores > 0.734* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
FBpp0288275	T-box	58	238	MTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDETNYCVLLEMVPIGDARYKFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRLHVIRTADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRE

Links
Other T-box family TFs
Other *Drosophila pseudoobscura* TFs