CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GF14390
(
Drosophila ananassae
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
FBgn0091417
T340640_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mid
M03994_2.00
Drosophila melanogaster
DAGGTGTKAN
NTMACACCTH
SELEX
Nitta et al.(2015)
mid_1
0.864
0.896
Tbx20
M00835_2.00
Mus musculus
NRRGTGTBAN
NTVACACYYN
PBM
Weirauch et al.(2013)
pTH3777
0.818
0.747
TBX20
M03565_2.00
Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT
SELEX
Jolma et al.(2013)
TBX20_1
0.818
0.747
TBX20
M03566_2.00
Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT
SELEX
Jolma et al.(2013)
TBX20_2
0.818
0.747
TBX20
M03567_2.00
Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN
SELEX
Jolma et al.(2013)
TBX20_3
0.818
0.747
TBX20
M03568_2.00
Homo sapiens
DAGGTGTGAWR
YWTCACACCTH
SELEX
Jolma et al.(2013)
TBX20_4
0.818
0.747
TBX20
M03569_2.00
Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT
SELEX
Jolma et al.(2013)
TBX20_5
0.818
0.747
TBX20
M05813_2.00
Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1
0.818
0.747
TBX20
M05814_2.00
Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2
0.818
0.747
TBX20
M05817_2.00
Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1
0.818
0.747
TBX20
M05818_2.00
Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2
0.818
0.747
Tbx20
M09430_2.00
Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN
Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C
0.818
0.747
Tbx20
M09650_2.00
Mus musculus
SCTGTCADCASN
NSTGHTGACAGS
Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636
0.818
0.747
TBX20
M11385_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX20_05
0.818
0.747
TBX20
M05815_2.00
Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1
0.818
0.747
TBX20
M05816_2.00
Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2
0.818
0.747
TBX20
M05819_2.00
Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1
0.818
0.747
TBX20
M05820_2.00
Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2
0.818
0.747
TBX18
M05797_2.00
Homo sapiens
DDAGGTGTGARV
BYTCACACCTHH
SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX
0.738
0.599
TBX18
M11380_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX18_01
0.738
0.599
TBX18
M05798_2.00
Homo sapiens
NDAGGYGTGAAN
NTTCACRCCTHN
SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX
0.738
0.599
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0117582
T-box
281
474
CHLETKELWDKFHELGTEMIITKSGRRMFPTVRVSFSGPLRQIQPPDRYAVLLDIVPLDSRRYRYAYHRSSWLVAGKADPPPPARIYAHPDSPISPEALRKQVVSFEKVKLTNNEMDKSGQVVLNSMHRYQPRIHLVRLSHGQSIPGNPKELQDMDHKTFVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRD
Links
Other
T-box
family TFs
Other
Drosophila ananassae
TFs
195 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_040540
Albugo laibachii
ALNC14_040540
N
ALNC14_040550
Albugo laibachii
ALNC14_040550
N
ALNC14_040560
Albugo laibachii
ALNC14_040560
N
ALNC14_040570
Albugo laibachii
ALNC14_040570
N
ALNC14_040580
Albugo laibachii
ALNC14_040580
N
ALNC14_040590
Albugo laibachii
ALNC14_040590
N
ALNC14_040600
Albugo laibachii
ALNC14_040600
N
ALNC14_040610
Albugo laibachii
ALNC14_040610
N
ALNC14_040620
Albugo laibachii
ALNC14_040620
N
ALNC14_040630
Albugo laibachii
ALNC14_040630
N
ALNC14_040640
Albugo laibachii
ALNC14_040640
N
ALNC14_040650
Albugo laibachii
ALNC14_040650
N
ALNC14_040660
Albugo laibachii
ALNC14_040660
N
ALNC14_040670
Albugo laibachii
ALNC14_040670
N
ALNC14_040680
Albugo laibachii
ALNC14_040680
N
ALNC14_040690
Albugo laibachii
ALNC14_040690
N
ALNC14_040700
Albugo laibachii
ALNC14_040700
N
ALNC14_040710
Albugo laibachii
ALNC14_040710
N
ALNC14_040720
Albugo laibachii
ALNC14_040720
N
ALNC14_040730
Albugo laibachii
ALNC14_040730
N
ALNC14_040740
Albugo laibachii
ALNC14_040740
N
ALNC14_040750
Albugo laibachii
ALNC14_040750
N
ALNC14_040760
Albugo laibachii
ALNC14_040760
N
ALNC14_040770
Albugo laibachii
ALNC14_040770
N
ALNC14_040780
Albugo laibachii
ALNC14_040780
N
ALNC14_040790
Albugo laibachii
ALNC14_040790
N
ALNC14_040800
Albugo laibachii
ALNC14_040800
N
ALNC14_040810
Albugo laibachii
ALNC14_040810
N
ALNC14_040820
Albugo laibachii
ALNC14_040820
N
ALNC14_040830
Albugo laibachii
ALNC14_040830
N
ALNC14_040840
Albugo laibachii
ALNC14_040840
N
ALNC14_061910
Albugo laibachii
ALNC14_061910
N
ALNC14_090760
Albugo laibachii
ALNC14_090760
N
ALUE_0000801801
Ascaris lumbricoides
ALUE_0000801801
I
ASIM_0001223701
Anisakis simplex
ASIM_0001223701
I
ASU_10106
Ascaris suum
ASU_10106
I
EDI_045210
Entamoeba dispar
EDI_045210
N
estExt_fgenesh1_kg.C_10721
Phytophthora capsici
estExt_fgenesh1_kg.C_10721
N
estExt_fgenesh1_kg.C_21048
Phytophthora capsici
estExt_fgenesh1_kg.C_21048
N
estExt_fgenesh1_kg.C_21051
Phytophthora capsici
estExt_fgenesh1_kg.C_21051
N
estExt_fgenesh1_pg.C_210371
Phytophthora capsici
estExt_fgenesh1_pg.C_210371
N
estExt_fgenesh1_pm.C_90123
Phytophthora capsici
estExt_fgenesh1_pm.C_90123
N
EVEC_0000124901
Enterobius vermicularis
EVEC_0000124901
I
F443_03190
Phytophthora parasitica
F443_03190
N
F443_06409
Phytophthora parasitica
F443_06409
N
F443_13225
Phytophthora parasitica
F443_13225
N
F443_16436
Phytophthora parasitica
F443_16436
N
F443_18702
Phytophthora parasitica
F443_18702
N
fgenesh-pir_contig_580-abinit-gene-0.31
Pythium irregulare
fgenesh-pir_contig_580-abinit-gene-0.31
N
fgenesh-piw_contig_392-abinit-gene-0.52
Pythium iwayamai
fgenesh-piw_contig_392-abinit-gene-0.52
N
fgenesh_scip_prom.28083.10919
Phytophthora lateralis
fgenesh_scip_prom.28083.10919
N
fgenesh_scip_prom.28083.11749
Phytophthora lateralis
fgenesh_scip_prom.28083.11749
N
fgenesh_scip_prom.28083.4437
Phytophthora lateralis
fgenesh_scip_prom.28083.4437
N
fgenesh_scip_prom.46568.1669
Phytophthora kernoviae
fgenesh_scip_prom.46568.1669
N
fgenesh_scip_prom.46568.2859
Phytophthora kernoviae
fgenesh_scip_prom.46568.2859
N
fgenesh_scip_prom.46568.7094
Phytophthora kernoviae
fgenesh_scip_prom.46568.7094
N
fgenesh_scip_prom.46568.8093
Phytophthora kernoviae
fgenesh_scip_prom.46568.8093
N
gw1.4.1286.1
Fragilariopsis cylindrus
gw1.4.1286.1
N
HpaG808860
Hyaloperonospora arabidopsidis
HpaG808860
N
HpaG810452
Hyaloperonospora arabidopsidis
HpaG810452
N
HpaG810973
Hyaloperonospora arabidopsidis
HpaG810973
N
HpaG812429
Hyaloperonospora arabidopsidis
HpaG812429
N
HpaG812432
Hyaloperonospora arabidopsidis
HpaG812432
N
maker-pag1_scaffold_1127-snap-gene-0.1
Pythium aphanidermatum
maker-pag1_scaffold_1127-snap-gene-0.1
I
maker-pag1_scaffold_183-snap-gene-0.28
Pythium aphanidermatum
maker-pag1_scaffold_183-snap-gene-0.28
N
maker-pag1_scaffold_287-snap-gene-0.16
Pythium aphanidermatum
maker-pag1_scaffold_287-snap-gene-0.16
N
maker-pag1_scaffold_438-snap-gene-0.7
Pythium aphanidermatum
maker-pag1_scaffold_438-snap-gene-0.7
N
maker-pag1_scaffold_66-snap-gene-0.49
Pythium aphanidermatum
maker-pag1_scaffold_66-snap-gene-0.49
N
maker-par_contig_1213-fgenesh-gene-0.2
Pythium arrhenomanes
maker-par_contig_1213-fgenesh-gene-0.2
N
maker-par_contig_383-fgenesh-gene-0.2
Pythium arrhenomanes
maker-par_contig_383-fgenesh-gene-0.2
N
maker-par_contig_654-snap-gene-0.10
Pythium arrhenomanes
maker-par_contig_654-snap-gene-0.10
N
maker-pir_contig_294-snap-gene-0.10
Pythium irregulare
maker-pir_contig_294-snap-gene-0.10
N
maker-pir_contig_320-snap-gene-0.13
Pythium irregulare
maker-pir_contig_320-snap-gene-0.13
N
maker-pir_contig_551-fgenesh-gene-0.4
Pythium irregulare
maker-pir_contig_551-fgenesh-gene-0.4
N
maker-pir_contig_698-fgenesh-gene-0.1
Pythium irregulare
maker-pir_contig_698-fgenesh-gene-0.1
N
maker-pir_contig_85-snap-gene-0.26
Pythium irregulare
maker-pir_contig_85-snap-gene-0.26
N
maker-piw_contig_207-snap-gene-0.13
Pythium iwayamai
maker-piw_contig_207-snap-gene-0.13
N
maker-pve_contig_635-fgenesh-gene-0.0
Pythium vexans
maker-pve_contig_635-fgenesh-gene-0.0
N
maker-pve_contig_642-fgenesh-gene-0.1
Pythium vexans
maker-pve_contig_642-fgenesh-gene-0.1
N
maker-pve_contig_642-fgenesh-gene-0.5
Pythium vexans
maker-pve_contig_642-fgenesh-gene-0.5
N
maker-pve_contig_835-fgenesh-gene-0.1
Pythium vexans
maker-pve_contig_835-fgenesh-gene-0.1
N
Phyra73275
Phytophthora ramorum
Phyra73275
N
Phyra76200
Phytophthora ramorum
Phyra76200
N
Phyra84925
Phytophthora ramorum
Phyra84925
N
Phyra85976
Phytophthora ramorum
Phyra85976
N
Physo129725
Phytophthora sojae
Physo129725
N
Physo129726
Phytophthora sojae
Physo129726
N
Physo130849
Phytophthora sojae
Physo130849
N
Physo131272
Phytophthora sojae
Physo131272
N
Physo134017
Phytophthora sojae
Physo134017
N
Physo134018
Phytophthora sojae
Physo134018
N
Physo134258
Phytophthora sojae
Physo134258
N
Physo144764
Phytophthora sojae
Physo144764
N
PITG_03306
Phytophthora infestans
PITG_03306
N
PITG_05353
Phytophthora infestans
PITG_05353
N
PITG_11760
Phytophthora infestans
PITG_11760
N
PITG_14513
Phytophthora infestans
PITG_14513
N
PITG_14514
Phytophthora infestans
PITG_14514
N
PITG_20646
Phytophthora infestans
PITG_20646
N
PITG_20647
Phytophthora infestans
PITG_20647
N
PYU1_G001667
Pythium ultimum
PYU1_G001667
N
PYU1_G003405
Pythium ultimum
PYU1_G003405
N
PYU1_G007450
Pythium ultimum
PYU1_G007450
N
PYU1_G009787
Pythium ultimum
PYU1_G009787
N
PYU1_G013874
Pythium ultimum
PYU1_G013874
N
PYU1_G013875
Pythium ultimum
PYU1_G013875
N
SMUV_0000043201
Syphacia muris
SMUV_0000043201
I
snap-par_contig_1252-abinit-gene-0.18
Pythium arrhenomanes
snap-par_contig_1252-abinit-gene-0.18
I
snap_masked-pve_contig_472-abinit-gene-0.36
Pythium vexans
snap_masked-pve_contig_472-abinit-gene-0.36
N
SPRG_00136
Saprolegnia parasitica
SPRG_00136
N
SPRG_00586
Saprolegnia parasitica
SPRG_00586
N
SPRG_04538
Saprolegnia parasitica
SPRG_04538
N
SPRG_06796
Saprolegnia parasitica
SPRG_06796
N
SPRG_10710
Saprolegnia parasitica
SPRG_10710
N
SPRG_18325
Saprolegnia parasitica
SPRG_18325
N
TCNE_0000949901
Toxocara canis
TCNE_0000949901
I