LCUP005947 (Lucilia cuprina)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 LCUP005947 T341231_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Doc3
M03990_2.00 		Drosophila melanogaster
NRGGTGTBAD
HTVACACCYN		 SELEX
Nitta et al.(2015)
Doc3_1 		0.850 0.873
Doc3
M03991_2.00 		Drosophila melanogaster
DAGGTGTBAN
NTVACACCTH		 SELEX
Nitta et al.(2015)
Doc3_2 		0.850 0.873
Doc2
M03992_2.00 		Drosophila melanogaster
DRGGTGTBAN
NTVACACCYH		 SELEX
Nitta et al.(2015)
Doc2_1 		0.816 0.862
Doc2
M03993_2.00 		Drosophila melanogaster
NAGGTGTBAN
NTVACACCTN		 SELEX
Nitta et al.(2015)
Doc2_2 		0.816 0.862
Doc2
M06454_2.00 		Drosophila melanogaster
ARGYGTGAA
TTCACRCYT		 B1H
Zhu et al.(2011)
Doc2_SANGER_5_FBgn0035956 		0.816 0.862
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP005947-PA T-box 61 241

Links

Other T-box family TFs
Other Lucilia cuprina TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL004174 Aedes aegypti AAEL004174 I 0.807
AAEL013504 Aedes aegypti AAEL013504 I 0.785
AALB004781 Anopheles albimanus AALB004781 I 0.775
AARA007626 Anopheles arabiensis AARA007626 I 0.788
AATE019626 Anopheles atroparvus AATE019626 I 0.788
ACHR005948 Anopheles christyi ACHR005948 I 0.788
ACOM024997 Anopheles coluzzii ACOM024997 I 0.788
ACUA013605 Anopheles culicifacies ACUA013605 I 0.788
ADAC005019 Anopheles darlingi ADAC005019 I 0.775
ADIR008855 Anopheles dirus ADIR008855 I 0.788
AEPI008783 Anopheles epiroticus AEPI008783 I 0.788
AFAF003219 Anopheles farauti AFAF003219 I 0.788
AFUN010103 Anopheles funestus AFUN010103 I 0.788
AGAP005895 Anopheles gambiae AGAP005895 I 0.788
AGAP005896 Anopheles gambiae AGAP005896 I 0.781
AMEC016175 Anopheles melas AMEC016175 I 0.788
AMEM015129 Anopheles merus AMEM015129 I 0.788
AMIN011562 Anopheles minimus AMIN011562 I 0.788
AQUA010990 Anopheles quadriannulatus AQUA010990 I 0.788
ASIS012852 Anopheles sinensis ASIS012852 I 0.788
ASTEI02809 Anopheles stephensi ASTEI02809 I 0.788
CPIJ004922 Culex quinquefasciatus CPIJ004922 I 0.751
CpipJ_CPIJ004922 Culex pipiens CpipJ_CPIJ004922 I 0.751
Doc1 Drosophila melanogaster FBgn0028789 I 0.856
Doc3 Drosophila melanogaster FBgn0035954 D 0.850
Doc2 Drosophila melanogaster FBgn0035956 D 0.816
GA18655 Drosophila pseudoobscura FBgn0078655 I 0.850
GA18682 Drosophila pseudoobscura FBgn0078682 I 0.856
GA18721 Drosophila pseudoobscura FBgn0078721 I 0.816
GF10130 Drosophila ananassae FBgn0087171 I 0.816
GF24374 Drosophila ananassae FBgn0101368 I 0.849
GF24375 Drosophila ananassae FBgn0101369 I 0.851
GG14368 Drosophila erecta FBgn0106627 I 0.850
GG14369 Drosophila erecta FBgn0106628 I 0.856
GG15041 Drosophila erecta FBgn0107295 I 0.816
GH14955 Drosophila grimshawi FBgn0122430 I 0.807
GH16540 Drosophila grimshawi FBgn0124011 I 0.856
GH16541 Drosophila grimshawi FBgn0124012 I 0.844
GI11482 Drosophila mojavensis FBgn0134242 I 0.806
GI13829 Drosophila mojavensis FBgn0136583 I 0.874
GI13831 Drosophila mojavensis FBgn0136585 I 0.829
GL15033 Drosophila persimilis FBgn0152637 I 0.850
GL15034 Drosophila persimilis FBgn0152638 I 0.856
GL15081 Drosophila persimilis FBgn0152685 I 0.816
GM24895 Drosophila sechellia FBgn0179757 I 0.816
GM25112 Drosophila sechellia FBgn0179973 I 0.850
GM25113 Drosophila sechellia FBgn0179974 I 0.856
GD14148 Drosophila simulans FBgn0185836 I 0.850
GD14149 Drosophila simulans FBgn0185837 I 0.856
GJ11695 Drosophila virilis FBgn0198949 I 0.875
GJ11697 Drosophila virilis FBgn0198951 I 0.847
GK12279 Drosophila willistoni FBgn0214289 I 0.817
GK12352 Drosophila willistoni FBgn0214362 I 0.850
GK12353 Drosophila willistoni FBgn0214363 I 0.851
GE20799 Drosophila yakuba FBgn0238093 I 0.850
GE20800 Drosophila yakuba FBgn0238094 I 0.856
GE21264 Drosophila yakuba FBgn0238533 I 0.808
LCUP005945 Lucilia cuprina LCUP005945 I 0.845
LCUP005946 Lucilia cuprina LCUP005946 I 0.826
MDOA003812 Musca domestica MDOA003812 I 0.821
MDOA006037 Musca domestica MDOA006037 I 0.814
MDOA015287 Musca domestica MDOA015287 I 0.914
MESCA005219 Megaselia scalaris MESCA005219 I 0.817
NEMVEDRAFT_v1g165815 Nematostella vectensis NEMVEDRAFT_v1g165815 N 0.735