CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AALB004781
(
Anopheles albimanus
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
AALB004781
T341329_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Doc2
M03992_2.00
Drosophila melanogaster
DRGGTGTBAN
NTVACACCYH
SELEX
Nitta et al.(2015)
Doc2_1
0.844
0.829
Doc2
M03993_2.00
Drosophila melanogaster
NAGGTGTBAN
NTVACACCTN
SELEX
Nitta et al.(2015)
Doc2_2
0.844
0.829
Doc2
M06454_2.00
Drosophila melanogaster
ARGYGTGAA
TTCACRCYT
B1H
Zhu et al.(2011)
Doc2_SANGER_5_FBgn0035956
0.844
0.829
Doc3
M03990_2.00
Drosophila melanogaster
NRGGTGTBAD
HTVACACCYN
SELEX
Nitta et al.(2015)
Doc3_1
0.803
0.790
Doc3
M03991_2.00
Drosophila melanogaster
DAGGTGTBAN
NTVACACCTH
SELEX
Nitta et al.(2015)
Doc3_2
0.803
0.790
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AALB004781-PA
T-box
63
243
VKLQNRDLWSQFAKIGTEMIITKSGRRMFPSMRLSVNGLEAEENYFILLEMVPISDCRFKFSGSQWVPAGGAEPQSPQRIYFHPDGPALGTHWTSQPIVFNKVKLTNNTLDSNGHIVLTSMHKYQPRIHVIKASDAAQIPWAPQQAFTFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRE
Links
Other
T-box
family TFs
Other
Anopheles albimanus
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL004174
Aedes aegypti
AAEL004174
I
0.830
AAEL013504
Aedes aegypti
AAEL013504
I
0.780
AARA007626
Anopheles arabiensis
AARA007626
I
0.907
AATE019626
Anopheles atroparvus
AATE019626
I
0.907
ACHR005948
Anopheles christyi
ACHR005948
I
0.907
ACOM024997
Anopheles coluzzii
ACOM024997
I
0.907
ACUA013605
Anopheles culicifacies
ACUA013605
I
0.907
ADAC005019
Anopheles darlingi
ADAC005019
I
0.920
ADIR008855
Anopheles dirus
ADIR008855
I
0.907
AEPI008783
Anopheles epiroticus
AEPI008783
I
0.907
AFAF003219
Anopheles farauti
AFAF003219
I
0.907
AFUN010103
Anopheles funestus
AFUN010103
I
0.907
AGAP005895
Anopheles gambiae
AGAP005895
I
0.907
AGAP005896
Anopheles gambiae
AGAP005896
I
0.776
AMEC016175
Anopheles melas
AMEC016175
I
0.907
AMEM015129
Anopheles merus
AMEM015129
I
0.907
AMIN011562
Anopheles minimus
AMIN011562
I
0.907
AQUA010990
Anopheles quadriannulatus
AQUA010990
I
0.907
ASIS012852
Anopheles sinensis
ASIS012852
I
0.907
ASTEI02809
Anopheles stephensi
ASTEI02809
I
0.907
CPIJ004922
Culex quinquefasciatus
CPIJ004922
I
0.807
CpipJ_CPIJ004922
Culex pipiens
CpipJ_CPIJ004922
I
0.807
Doc1
Drosophila melanogaster
FBgn0028789
I
0.822
Doc3
Drosophila melanogaster
FBgn0035954
D
0.803
Doc2
Drosophila melanogaster
FBgn0035956
D
0.844
GA18655
Drosophila pseudoobscura
FBgn0078655
I
0.803
GA18682
Drosophila pseudoobscura
FBgn0078682
I
0.822
GA18721
Drosophila pseudoobscura
FBgn0078721
I
0.844
GF10130
Drosophila ananassae
FBgn0087171
I
0.844
GF24374
Drosophila ananassae
FBgn0101368
I
0.803
GF24375
Drosophila ananassae
FBgn0101369
I
0.817
GG14368
Drosophila erecta
FBgn0106627
I
0.803
GG14369
Drosophila erecta
FBgn0106628
I
0.822
GG15041
Drosophila erecta
FBgn0107295
I
0.844
GH14955
Drosophila grimshawi
FBgn0122430
I
0.835
GH16540
Drosophila grimshawi
FBgn0124011
I
0.784
GH16541
Drosophila grimshawi
FBgn0124012
I
0.817
GI11482
Drosophila mojavensis
FBgn0134242
I
0.836
GI13829
Drosophila mojavensis
FBgn0136583
I
0.779
GI13831
Drosophila mojavensis
FBgn0136585
I
0.824
GL15033
Drosophila persimilis
FBgn0152637
I
0.803
GL15034
Drosophila persimilis
FBgn0152638
I
0.822
GL15081
Drosophila persimilis
FBgn0152685
I
0.844
GM24895
Drosophila sechellia
FBgn0179757
I
0.844
GM25112
Drosophila sechellia
FBgn0179973
I
0.803
GM25113
Drosophila sechellia
FBgn0179974
I
0.822
GD14148
Drosophila simulans
FBgn0185836
I
0.803
GD14149
Drosophila simulans
FBgn0185837
I
0.822
GJ11695
Drosophila virilis
FBgn0198949
I
0.769
GJ11697
Drosophila virilis
FBgn0198951
I
0.812
GK12279
Drosophila willistoni
FBgn0214289
I
0.844
GK12352
Drosophila willistoni
FBgn0214362
I
0.803
GK12353
Drosophila willistoni
FBgn0214363
I
0.817
GE20799
Drosophila yakuba
FBgn0238093
I
0.803
GE20800
Drosophila yakuba
FBgn0238094
I
0.822
GE21264
Drosophila yakuba
FBgn0238533
I
0.836
LCUP005945
Lucilia cuprina
LCUP005945
I
0.833
LCUP005946
Lucilia cuprina
LCUP005946
I
0.828
LCUP005947
Lucilia cuprina
LCUP005947
I
0.775
MDOA003812
Musca domestica
MDOA003812
I
0.812
MDOA006037
Musca domestica
MDOA006037
I
0.843
MDOA015287
Musca domestica
MDOA015287
I
0.773
MESCA005219
Megaselia scalaris
MESCA005219
I
0.783