CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SROB_0001340001
(
Schistosoma rodhaini
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
SROB_0001340001
T341961_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0001340001-mRNA-1
T-box
1
147
MLLIQPHIFKHQGDRWIISSQSEVLNNNQTLEGKYYIQEESPKTGAYWMESGVNFTRVKITNTKEIKPYKNMIHVNSMHYYIPRISVVRLNNSMNNQSNCYHSSNQLELIGSYIIPGTQFYTVTAYQNPDVIRIKINNNPFAKGFRN
Links
Other
T-box
family TFs
Other
Schistosoma rodhaini
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_06755
Schistosoma haematobium
A_06755
N
0.833
DILT_0000614001
Diphyllobothrium latum
DILT_0000614001
N
0.776
Sjc_0097200
Schistosoma japonicum
Sjc_0097200
N
0.777
Smp_077500
Schistosoma mansoni
Smp_077500
N
0.920
SMRZ_0000066101
Schistosoma margrebowiei
SMRZ_0000066101
N
0.751
TRE_0000571301
Trichobilharzia regenti
TRE_0000571301
N
0.883