AACERI_AaceriAGR134W (Saccharomycetaceae sp ashbya aceri)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 AACERI_AaceriAGR134W T342098_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.988 0.988
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.988 0.988
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.988 0.988
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.808 0.808
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.808 0.808
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.808 0.808
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.808 0.808
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.808 0.808
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.808 0.808
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.808 0.808
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.808 0.808
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.808 0.808
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.808 0.808
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AGO13992 TBP 63 145
AGO13992 TBP 153 236

Links

Other TBP family TFs
Other Saccharomycetaceae sp ashbya aceri TFs

750 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30174.m009031 Ricinus communis 30174.m009031 I
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I
cassava4119.m1 Manihot esculenta cassava4119.m1 I
cassava9303.m1 Manihot esculenta cassava9303.m1 I
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I
gene26182-v1.0-hybrid Fragaria vesca gene26182-v1.0-hybrid N
GLYMA05G07690 Glycine max GLYMA05G07690 I
GLYMA17G13320 Glycine max GLYMA17G13320 I
MDP0000157628 Malus domestica MDP0000157628 I
MDP0000197375 Malus domestica MDP0000197375 I
MTR_7g011630 Medicago truncatula MTR_7g011630 I
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I
PK28640.1 Cannabis sativa PK28640.1 I
Pm030235 Prunus mume Pm030235 I
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N
TCM_014471 Theobroma cacao TCM_014471 I
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I