tbpl2 (Tetraodon nigroviridis)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 ENSTNIG00000002597 T342437_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.946 0.946
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.946 0.946
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.946 0.946
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.946 0.946
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.946 0.946
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.946 0.946
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.946 0.946
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.946 0.946
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.946 0.946
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.946 0.946
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.790 0.790
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.790 0.790
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.790 0.790
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000005149 TBP 133 215
ENSTNIP00000005149 TBP 223 306

Links

Other TBP family TFs
Other Tetraodon nigroviridis TFs

785 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZSCAN23 Bos taurus ENSBTAG00000037965 I
ZSCAN23 Canis familiaris ENSCAFG00000024985 I
ZSCAN23 Choloepus hoffmanni ENSCHOG00000004064 I
ZSCAN23 Callithrix jacchus ENSCJAG00000018616 I
ENSCSAG00000008044 Chlorocebus sabaeus ENSCSAG00000008044 I
ZSCAN23 Equus caballus ENSECAG00000016879 I
ENSEEUG00000006981 Erinaceus europaeus ENSEEUG00000006981 I
ZSCAN23 Homo sapiens ENSG00000187987 D
ZSCAN23 Gorilla gorilla ENSGGOG00000024543 I
ZSCAN23 Microcebus murinus ENSMICG00000010510 I
ZSCAN23 Macaca mulatta ENSMMUG00000012396 I
ZSCAN9 Monodelphis domestica ENSMODG00000008321 I
ENSMPUG00000001273 Mustela putorius furo ENSMPUG00000001273 I
ENSNLEG00000004577 Nomascus leucogenys ENSNLEG00000004577 I
ZSCAN23 Oryctolagus cuniculus ENSOCUG00000029301 I
ZSCAN23 Otolemur garnettii ENSOGAG00000006605 I
ENSPANG00000012448 Papio anubis ENSPANG00000012448 I
ZSCAN23 Procavia capensis ENSPCAG00000015061 I
ENSPPYG00000016373 Pongo abelii ENSPPYG00000016373 I
ZSCAN23 Pan troglodytes ENSPTRG00000017876 I
ZSCAN23 Sorex araneus ENSSARG00000008482 I
ENSSTOG00000004477 Ictidomys tridecemlineatus ENSSTOG00000004477 I
ENSTSYG00000000711 Tarsius syrichta ENSTSYG00000000711 I
ZSCAN23 Tursiops truncatus ENSTTRG00000015648 I
ZSCAN23 Vicugna pacos ENSVPAG00000000043 I