GSMUA_Achr10G08540_001 (Musa acuminata)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 GSMUA_Achr10G08540_001 T342584_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.808 0.808
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.808 0.808
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.808 0.808
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.784 0.784
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.784 0.784
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.784 0.784
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.784 0.784
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.784 0.784
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.784 0.784
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.784 0.784
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.784 0.784
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.784 0.784
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.784 0.784
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr10P08540_001 TBP 25 107
GSMUA_Achr10P08540_001 TBP 115 198

Links

Other TBP family TFs
Other Musa acuminata TFs

749 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_014530 Acremonium chrysogenum ACRE_014530 N
BBA_00521 Beauveria bassiana BBA_00521 N
Bcin05g01760 Botrytis cinerea Bcin05g01760 N
BGHDH14_bghG006987000001001 Blumeria graminis BGHDH14_bghG006987000001001 N
ACLA_030120 Aspergillus clavatus CADACLAG00001678 N
AFUA_1G04550 Aspergillus fumigatus CADAFUAG00009157 N
NFIA_020200 Neosartorya fischeri CADNFIAG00000998 N
CCM_00095 Cordyceps militaris CCM_00095 N
CFIO01_08353 Colletotrichum fioriniae CFIO01_08353 N
CGGC5_8845 Colletotrichum gloeosporioides CGGC5_8845 N
CH063_03229 Colletotrichum higginsianum CH063_03229 N
CHGG_00871 Chaetomium globosum CHGG_00871 N
CMQ_4658 Grosmannia clavigera CMQ_4658 N
Cob_13319 Colletotrichum orbiculare Cob_13319 N
CPUR_00112 Claviceps purpurea CPUR_00112 N
CSUB01_02897 Colletotrichum sublineola CSUB01_02897 N
CTHT_0060550 Chaetomium thermophilum CTHT_0060550 N
EPUS_02925 Endocarpon pusillum EPUS_02925 N
estExt_fgenesh3_kg.C_70275 Neurospora discreta estExt_fgenesh3_kg.C_70275 N
estExt_Genewise1Plus.C_41039 Cryphonectria parasitica estExt_Genewise1Plus.C_41039 N
EV44_g1131 Erysiphe necator EV44_g1131 N
F503_02843 Ophiostoma piceae uamh F503_02843 N
FFUJ_00508 Fusarium fujikuroi FFUJ_00508 N
fgenesh1_pg.sca_1_chr1_3_0000978 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000978 N
FOXG_01060 Fusarium oxysporum FOXG_01060 N
FPSE_01400 Fusarium pseudograminearum FPSE_01400 N
FVEG_00454 Fusarium verticillioides FVEG_00454 N
GGTG_07805 Gaeumannomyces graminis GGTG_07805 N
GLRG_00634 Colletotrichum graminicola GLRG_00634 N
GMDG_02547 Pseudogymnoascus destructans GMDG_02547 N
HMPREF1624_07501 Sporothrix schenckii HMPREF1624_07501 N
M7I_8110 Glarea lozoyensis M7I_8110 N
MAC_07492 Metarhizium acridum MAC_07492 N
MAJ_07143 Metarhizium majus MAJ_07143 N
MAM_03379 Metarhizium album MAM_03379 N
MANI_019755 Metarhizium anisopliae MANI_019755 N
MBM_03545 Marssonina brunnea MBM_03545 N
MBR_08071 Metarhizium brunneum MBR_08071 N
MGG_01325 Magnaporthe oryzae MGG_01325 N
MGU_03640 Metarhizium guizhouense MGU_03640 N
MYCTH_2296180 Myceliophthora thermophila MYCTH_2296180 N
NCU03126 Neurospora crassa NCU03126 N
NechaG75367 Fusarium solani NechaG75367 N
NEUTE1DRAFT_150185 Neurospora tetrasperma NEUTE1DRAFT_150185 N
OCS_05805 Ophiocordyceps sinensis OCS_05805 N
OIDMADRAFT_43965 Oidiodendron maius OIDMADRAFT_43965 N
Pc16g09240 Penicillium chrysogenum Pc16g09240 N
PCH_Pc16g09240 Penicillium rubens PCH_Pc16g09240 N
PDIP_20560 Penicillium digitatum PDIP_20560 N
PEX1_048030 Penicillium expansum PEX1_048030 N
PFICI_06243 Pestalotiopsis fici PFICI_06243 N
PITC_020100 Penicillium italicum PITC_020100 N
PMAA_054260 Penicillium marneffei PMAA_054260 N
PMAA_054260 Talaromyces marneffei PMAA_054260 N
PODANS_1_11050 Podospora anserina PODANS_1_11050 N
S40285_08298 Stachybotrys chlorohalonata S40285_08298 N
S40288_06952 Stachybotrys chartarum S40288_06952 N
SAPIO_CDS5487 Scedosporium apiospermum SAPIO_CDS5487 N
SBOR_0586 Sclerotinia borealis SBOR_0586 N
SMAC_02857 Sordaria macrospora SMAC_02857 N
SPBR_07025 Sporothrix brasiliensis SPBR_07025 N
SS1G_05783 Sclerotinia sclerotiorum SS1G_05783 N
THITE_2065779 Thielavia terrestris THITE_2065779 N
TRIATDRAFT_302680 Trichoderma atroviride TRIATDRAFT_302680 N
TRIREDRAFT_108909 Trichoderma reesei TRIREDRAFT_108909 N
TRIVIDRAFT_208143 Trichoderma virens TRIVIDRAFT_208143 N
TRIVIDRAFT_35357 Trichoderma virens TRIVIDRAFT_35357 N
TSTA_018670 Talaromyces stipitatus TSTA_018670 N
U727_00434111271 Penicillium solitum U727_00434111271 N
UCREL1_3474 Eutypa lata UCREL1_3474 N
UCRPA7_6165 Togninia minima UCRPA7_6165 N
UV8b_1930 Ustilaginoidea virens UV8b_1930 N
V499_06192 Pseudogymnoascus pannorum V499_06192 N
VDAG_00928 Verticillium dahliae VDAG_00928 N
VHEMI05033 Torrubiella hemipterigena VHEMI05033 N
X797_006248 Metarhizium robertsii X797_006248 N