CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMTD_0001467001
(
Schistosoma mattheei
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
SMTD_0001467001
T343601_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMTD_0001467001-mRNA-1
TBP
1
39
MVSTVDLGCPIELRKLVLHVRSAEYNPRRFPGVXXXXXX
SMTD_0001467001-mRNA-1
TBP
102
165
NFTIQNMVGLADLRFPIRLEGVQLANEQMTQYEPEIFPALIYRIIKPRLVMLIFVNGKIVMTGK
Links
Other
TBP
family TFs
Other
Schistosoma mattheei
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_51673
Hordeum vulgare
MLOC_51673
N
MLOC_9956
Hordeum vulgare
MLOC_9956
N
Pavir.Bb01348
Panicum virgatum
Pavir.Bb01348
N
Pavir.Db00839
Panicum virgatum
Pavir.Db00839
N
Pavir.J04547
Panicum virgatum
Pavir.J04547
N
Pavir.J19504
Panicum virgatum
Pavir.J19504
N
Pavir.J20130
Panicum virgatum
Pavir.J20130
N
Pavir.J23522
Panicum virgatum
Pavir.J23522
N
Pavir.J27247
Panicum virgatum
Pavir.J27247
N
Traes_7BL_EBACA7012
Triticum aestivum
Traes_7BL_EBACA7012
N
TRIUR3_33125
Triticum urartu
TRIUR3_33125
N