AMTR_s00016p00227430 (Amborella trichopoda)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 AMTR_s00016p00227430 T343663_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK13314.1
M01316_2.00 		Cannabis sativa
NNGGNCCCAC
GTGGGNCCNN		 PBM
Lambert et al.(2019)
pTH11330 		0.971 0.678
GLYMA19G26560
M02511_2.00 		Glycine max
BGGBCCCAC
GTGGGVCCV		 PBM
Weirauch et al.(2014)
pTH9184 		0.969 0.643
cassava45561.m1
M02516_2.00 		Manihot esculenta
KGGVCCCACH
DGTGGGBCCM		 PBM
Weirauch et al.(2014)
pTH9207 		0.969 0.635
TCP20
M02502_2.00 		Arabidopsis thaliana
GGSCCCACNN
NNGTGGGSCC		 PBM
Weirauch et al.(2014)
pTH8159 		0.968 0.609
TCP20
M07285_2.00 		Arabidopsis thaliana
NNNNNNNNNNGTGGGRCCCAC
GTGGGYCCCACNNNNNNNNNN		 Dap-seq
OMalley et al.(2016)
TCP20_col_a 		0.968 0.609
TCP20
M07286_2.00 		Arabidopsis thaliana
RTGGGDCCCACH
DGTGGGHCCCAY		 Dap-seq
OMalley et al.(2016)
TCP20_colamp_a 		0.968 0.609
TCP20
M11397_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP20_01 		0.968 0.609
AT-TCP20
M02507_2.00 		Arabidopsis lyrata
GRSCCCAC
GTGGGSYC		 PBM
Weirauch et al.(2014)
pTH9229 		0.968 0.600
PK12736.1
M01315_2.00 		Cannabis sativa
NRRSCMYAYNNNNN
NNNNNRTRKGSYYN		 PBM
Lambert et al.(2019)
pTH10121 		0.959 0.557
TCP14
M07289_2.00 		Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC
GTGGGHCCCACVHBMTHTBT		 Dap-seq
OMalley et al.(2016)
TCP14_col_b 		0.957 0.600
VIT_15s0048g01150
M02515_2.00 		Vitis vinifera
NNGGNCCCAC
GTGGGNCCNN		 PBM
Weirauch et al.(2014)
pTH9294 		0.957 0.530
PCF2
M11399_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF2_01 		0.956 0.522
TCP9
M01086_2.00 		Arabidopsis thaliana
NNGGGCCCACN
NGTGGGCCCNN		 PBM
Sullivan et al.(2014)
pTH9796 		0.954 0.522
TCP9
M07281_2.00 		Arabidopsis thaliana
RTGGGDCCCAC
GTGGGHCCCAY		 Dap-seq
OMalley et al.(2016)
At2g45680_colamp_a 		0.954 0.522
TCP9
M07282_2.00 		Arabidopsis thaliana
DGTGGGRCCCACDDNDNDNBN
NVNHNHNHHGTGGGYCCCACH		 Dap-seq
OMalley et al.(2016)
At2g45680_col_b 		0.954 0.522
TCP15
M00892_2.00 		Arabidopsis thaliana
NNGGNCCCAC
GTGGGNCCNN		 PBM
Franco-Zorrilla et al.(2014)
TCP15 		0.953 0.548
TCP15
M07277_2.00 		Arabidopsis thaliana
RTRGGDCCCACHH
DDGTGGGHCCYAY		 Dap-seq
OMalley et al.(2016)
At1g69690_col_a 		0.953 0.548
TCP15
M07278_2.00 		Arabidopsis thaliana
RTRGGNCCCACHW
WDGTGGGNCCYAY		 Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a 		0.953 0.548
TCP15
M11394_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP15_01 		0.953 0.548
TCP8
M01311_2.00 		Arabidopsis thaliana
NGGNMCCAC
GTGGKNCCN		 PBM
Lambert et al.(2019)
pTH11569 		0.953 0.557
LjSGA_053525.1
M02518_2.00 		Lotus japonicus
GGNCCCAC
GTGGGNCC		 PBM
Weirauch et al.(2014)
pTH9201 		0.951 0.513
TCP22
M07279_2.00 		Arabidopsis thaliana
RTRGGNCCCACHN
NDGTGGGNCCYAY		 Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a 		0.950 0.548
TCP22
M07280_2.00 		Arabidopsis thaliana
RTGGGDCCCACNN
NNGTGGGHCCCAY		 Dap-seq
OMalley et al.(2016)
At1g72010_col 		0.950 0.548
PK14653.1
M01317_2.00 		Cannabis sativa
BGGSCCCAC
GTGGGSCCV		 PBM
Lambert et al.(2019)
pTH11324 		0.950 0.530
PK14653.1
M02517_2.00 		Cannabis sativa
BTGGGCCCAV
BTGGGCCCAV		 PBM
Weirauch et al.(2014)
pTH9586 		0.950 0.530
TCP23
M00891_2.00 		Arabidopsis thaliana
NNGGKCCCAC
GTGGGMCCNN		 PBM
Franco-Zorrilla et al.(2014)
TCP23 		0.949 0.557
TCP19
M02504_2.00 		Arabidopsis thaliana
NNGGVCCCAC
GTGGGBCCNN		 PBM
Weirauch et al.(2014)
pTH7452 		0.944 0.496
TCP7
M07294_2.00 		Arabidopsis thaliana
RTGGGNCCCAC
GTGGGNCCCAY		 Dap-seq
OMalley et al.(2016)
TCP7_col_a 		0.942 0.557
fgenesh2_kg.8__1074__AT5G51910.2
M02509_2.00 		Arabidopsis lyrata
GRSCCCAC
GTGGGSYC		 PBM
Weirauch et al.(2014)
pTH9232 		0.941 0.522
TCP21
M07292_2.00 		Arabidopsis thaliana
NNRTGGGDCCCACN
NGTGGGHCCCAYNN		 Dap-seq
OMalley et al.(2016)
At5g08330_col_a 		0.939 0.539
TCP21
M07293_2.00 		Arabidopsis thaliana
RTRGGDCCCACH
DGTGGGHCCYAY		 Dap-seq
OMalley et al.(2016)
At5g08330_colamp_a 		0.939 0.539
OS02G0635800
M02512_2.00 		Oryza sativa
NBGGGCCCVN
NBGGGCCCVN		 PBM
Weirauch et al.(2014)
pTH8856 		0.926 0.461
OsI_08196
M02513_2.00 		Oryza sativa
GGGCCCAC
GTGGGCCC		 PBM
Weirauch et al.(2014)
pTH9274 		0.926 0.452
TCP11
M11395_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP11_01 		0.882 0.470
TCP11
M11396_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP11_02 		0.882 0.470
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN06299 TCP 63 298

Links

Other TCP family TFs
Other Amborella trichopoda TFs

651 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PDP1 Aedes aegypti AAEL005255 I
AALB004300 Anopheles albimanus AALB004300 I
Aan_R004902 Calypte anna Aan_R004902 I
AARA000887 Anopheles arabiensis AARA000887 I
AATE006511 Anopheles atroparvus AATE006511 I
ACEP27179 Atta cephalotes ACEP27179 I
ACOM039838 Anopheles coluzzii ACOM039838 I
ACUA004794 Anopheles culicifacies ACUA004794 I
ACYPI000702 Acyrthosiphon pisum ACYPI000702 I
ADAC004162 Anopheles darlingi ADAC004162 I
ADIR007438 Anopheles dirus ADIR007438 I
AEPI005427 Anopheles epiroticus AEPI005427 I
AFAF017409 Anopheles farauti AFAF017409 I
Afo_R002997 Aptenodytes forsteri Afo_R002997 I
AFUN000141 Anopheles funestus AFUN000141 I
PDP1 Anopheles gambiae AGAP006376 I
Alligator_sinensis_CCG020587.1 Alligator sinensis Alligator_sinensis_CCG020587.1 I
AMEM018156 Anopheles merus AMEM018156 I
AMIN007990 Anopheles minimus AMIN007990 I
ANCCEY_04799 Ancylostoma ceylanicum ANCCEY_04799 N
ANCDUO_14303 Ancylostoma duodenale ANCDUO_14303 I
AQUA000938 Anopheles quadriannulatus AQUA000938 I
ASIS001542 Anopheles sinensis ASIS001542 I
ASTEI09431 Anopheles stephensi ASTEI09431 I
BGIBMGA003874 Bombyx mori BGIBMGA003874 I
Brh_R008067 Buceros rhinoceros Brh_R008067 I
CapteG151518 Capitella teleta CapteG151518 I
Cflo_03674--XP_391997.2_APIME Camponotus floridanus Cflo_03674--XP_391997.2_APIME I
CGI_10008414 Crassostrea gigas CGI_10008414 I
CLEC008918 Cimex lectularius CLEC008918 I
Cmyd_10013489 Chelonia mydas Cmyd_10013489 I
PDP1 Culex quinquefasciatus CPIJ014920 I
CpipJ_CPIJ014920 Culex pipiens CpipJ_CPIJ014920 I
HLF Anolis carolinensis ENSACAG00000017417 I
ENSAMEG00000014714 Ailuropoda melanoleuca ENSAMEG00000014714 I
ENSAMXG00000008798 Astyanax mexicanus ENSAMXG00000008798 I
ENSAMXG00000015442 Astyanax mexicanus ENSAMXG00000015442 I
ENSAPLG00000004386 Anas platyrhynchos ENSAPLG00000004386 I
HLF Bos taurus ENSBTAG00000006618 I
ENSBTAP00000008682-D1 Bos grunniens ENSBTAP00000008682-D1 I
HLF Canis familiaris ENSCAFG00000030851 I
ENSCHOG00000001396 Choloepus hoffmanni ENSCHOG00000001396 I
HLF Callithrix jacchus ENSCJAG00000011298 I
ENSCPOG00000011000 Cavia porcellus ENSCPOG00000011000 I
ENSCSAG00000005557 Chlorocebus sabaeus ENSCSAG00000005557 I
hlfa Danio rerio ENSDARG00000074752 I
ENSDORG00000012644 Dipodomys ordii ENSDORG00000012644 I
HLF Equus caballus ENSECAG00000016953 I
HLF Erinaceus europaeus ENSEEUG00000010964 I
HLF Echinops telfairi ENSETEG00000017670 I
ENSFALG00000002265 Ficedula albicollis ENSFALG00000002265 I
HLF Felis catus ENSFCAG00000022556 I
HLF Homo sapiens ENSG00000108924 D
tefb Gasterosteus aculeatus ENSGACG00000007628 I
hlfb Gasterosteus aculeatus ENSGACG00000010103 I
HLF Gallus gallus ENSGALG00000003059 I
HLF Gorilla gorilla ENSGGOG00000006075 I
ENSGMOG00000004830 Gadus morhua ENSGMOG00000004830 I
ENSLACG00000012701 Latimeria chalumnae ENSLACG00000012701 I
ENSLACG00000012726 Latimeria chalumnae ENSLACG00000012726 I
HLF Loxodonta africana ENSLAFG00000016475 I
ENSLOCG00000011595 Lepisosteus oculatus ENSLOCG00000011595 I
ENSLOCG00000012233 Lepisosteus oculatus ENSLOCG00000012233 I
ENSMEUG00000016384 Macropus eugenii ENSMEUG00000016384 I
ENSMICG00000002860 Microcebus murinus ENSMICG00000002860 I
HLF Myotis lucifugus ENSMLUG00000007393 I
HLF Macaca mulatta ENSMMUG00000022627 I
HLF Monodelphis domestica ENSMODG00000014851 I
ENSMPUG00000015400 Mustela putorius furo ENSMPUG00000015400 I
Hlf Mus musculus ENSMUSG00000003949 D
ENSNLEG00000007993 Nomascus leucogenys ENSNLEG00000007993 I
HLF Ornithorhynchus anatinus ENSOANG00000010288 I
HLF Oryctolagus cuniculus ENSOCUG00000010547 I
HLF Otolemur garnettii ENSOGAG00000007056 I
ENSONIG00000008480 Oreochromis niloticus ENSONIG00000008480 I
ENSONIG00000009563 Oreochromis niloticus ENSONIG00000009563 I
ENSONIG00000019079 Oreochromis niloticus ENSONIG00000019079 I
ENSONIG00000019694 Oreochromis niloticus ENSONIG00000019694 I
HLF Ochotona princeps ENSOPRG00000004195 I
hlfa Oryzias latipes ENSORLG00000000969 I
tefb Oryzias latipes ENSORLG00000014144 I
ENSP00000226067 Macaca fascicularis ENSP00000226067 I
ENSPANG00000022360 Papio anubis ENSPANG00000022360 I
ENSPFOG00000004560 Poecilia formosa ENSPFOG00000004560 I
ENSPFOG00000013950 Poecilia formosa ENSPFOG00000013950 I
ENSPFOG00000018222 Poecilia formosa ENSPFOG00000018222 I
ENSPPYG00000008257 Pongo abelii ENSPPYG00000008257 I
ENSPSIG00000016356 Pelodiscus sinensis ENSPSIG00000016356 I
HLF Pan troglodytes ENSPTRG00000009424 I
HLF Pteropus vampyrus ENSPVAG00000007461 I
Hlf Rattus norvegicus ENSRNOG00000002456 I
ENSSARG00000013841 Sorex araneus ENSSARG00000013841 I
ENSSHAG00000015304 Sarcophilus harrisii ENSSHAG00000015304 I
ENSSTOG00000029018 Ictidomys tridecemlineatus ENSSTOG00000029018 I
HLF Tupaia belangeri ENSTBEG00000006958 I
HLF Taeniopygia guttata ENSTGUG00000009478 I
ENSTNIG00000003545 Tetraodon nigroviridis ENSTNIG00000003545 I
tefb Takifugu rubripes ENSTRUG00000003565 I
hlfb Takifugu rubripes ENSTRUG00000003909 I
ENSTSYG00000009210 Tarsius syrichta ENSTSYG00000009210 I
HLF Tursiops truncatus ENSTTRG00000007194 I
ENSXMAG00000012903 Xiphophorus maculatus ENSXMAG00000012903 I
ENSXMAG00000016939 Xiphophorus maculatus ENSXMAG00000016939 I
Pdp1 Drosophila melanogaster FBgn0016694 D
GF24150 Drosophila ananassae FBgn0101144 I
GG14935 Drosophila erecta FBgn0107189 I
GH23565 Drosophila grimshawi FBgn0131022 I
GI12193 Drosophila mojavensis FBgn0134950 I
GL17823 Drosophila persimilis FBgn0155426 I
GM24985 Drosophila sechellia FBgn0179846 I
GD13032 Drosophila simulans FBgn0184754 I
GJ11425 Drosophila virilis FBgn0198683 I
GK10510 Drosophila willistoni FBgn0212525 I
GE20386 Drosophila yakuba FBgn0237702 I
GA28498 Drosophila pseudoobscura FBgn0249858 I
GB43643 Apis mellifera GB43643 I
Gfo_R006518 Geospiza fortis Gfo_R006518 I
HMEL011029 Heliconius melpomene HMEL011029 I
Hsal_12188--XP_391997.2_APIME Harpegnathos saltator Hsal_12188--XP_391997.2_APIME I
ISCW004978 Ixodes scapularis ISCW004978 I
KGM_21614 Danaus plexippus KGM_21614 I
L596_g3194 Steinernema carpocapsae L596_g3194 I
L898_g30246 Steinernema monticolum L898_g30246 I
LCUP014933 Lucilia cuprina LCUP014933 I
MCINX004280 Melitaea cinxia MCINX004280 I
MDOA003519 Musca domestica MDOA003519 I
Myotis_brandtii_Hlf_10020713 Myotis brandtii Myotis_brandtii_Hlf_10020713 I
NV13265 Nasonia vitripennis NV13265 I
Ogr00037 Ophisaurus gracilis Ogr00037 I
PHUM426270 Pediculus humanus PHUM426270 I
PPAI002842 Phlebotomus papatasi PPAI002842 I
Pvit_00680 Pogona vitticeps Pvit_00680 I
SMAR002779 Strigamia maritima SMAR002779 I
Tal_R009182 Tyto alba Tal_R009182 I
YQE_01842 Dendroctonus ponderosae YQE_01842 I