TCP3 (Arabidopsis thaliana)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 AT1G53230 T343677_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP3
M02500_2.00		 Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835		 (Direct) (Direct)
TCP3
M07274_2.00		 Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a		 (Direct) (Direct)
TCP3
M07275_2.00		 Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.962 0.623
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.959 0.614
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.937 0.535
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.896 0.412
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.883 0.412
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.881 0.430
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.880 0.395
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.852 0.412
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.852 0.412
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.844 0.368
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.837 0.386
For this family, TFs with SR scores > 0.822 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02500_2.00 TCP 47 250

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G53230.1 TCP 47 250
AT1G53230.2 TCP 47 250

Links

Other TCP family TFs
Other Arabidopsis thaliana TFs

422 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_239429 Agaricus bisporus AGABI2DRAFT_239429 N
BBA_06721 Beauveria bassiana BBA_06721 I
BN946_scf184920.g52 Trametes cinnabarina BN946_scf184920.g52 I
BOTBODRAFT_93074 Botryobasidium botryosum BOTBODRAFT_93074 N
CC1G_08635 Coprinopsis cinerea CC1G_08635 N
CERSUDRAFT_109986 Ceriporiopsis subvermispora CERSUDRAFT_109986 N
CY34DRAFT_809202 Suillus luteus CY34DRAFT_809202 N
DACRYDRAFT_24120 Dacryopinax sp DACRYDRAFT_24120 I
DICSQDRAFT_66188 Dichomitus squalens DICSQDRAFT_66188 I
DRE_03900 Drechslerella stenobrocha DRE_03900 I
estExt_Genewise1Plus.C_sca_2_chr3_3_01039 Nectria haematococca estExt_Genewise1Plus.C_sca_2_chr3_3_01039 I
FFUJ_06219 Fusarium fujikuroi FFUJ_06219 I
fgenesh1_pg.C_scaffold_14000237 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_14000237 N
FIBRA_01656 Fibroporia radiculosa FIBRA_01656 I
FOMPIDRAFT_1017957 Fomitopsis pinicola FOMPIDRAFT_1017957 N
FVEG_01956 Fusarium verticillioides FVEG_01956 I
GALMADRAFT_217801 Galerina marginata GALMADRAFT_217801 N
GLOTRDRAFT_69493 Gloeophyllum trabeum GLOTRDRAFT_69493 I
GSTUM_00002563001 Tuber melanosporum GSTUM_00002563001 I
gw1.1.2337.1 Heterobasidion annosum gw1.1.2337.1 N
HETIRDRAFT_443323 Heterobasidion irregulare HETIRDRAFT_443323 N
HYDPIDRAFT_161884 Hydnomerulius pinastri HYDPIDRAFT_161884 N
JAAARDRAFT_60403 Jaapia argillacea JAAARDRAFT_60403 N
K443DRAFT_677716 Laccaria amethystina K443DRAFT_677716 N
LACBIDRAFT_242593 Laccaria bicolor LACBIDRAFT_242593 N
M378DRAFT_66555 Amanita muscaria M378DRAFT_66555 N
M404DRAFT_43642 Pisolithus tinctorius M404DRAFT_43642 N
M407DRAFT_78353 Tulasnella calospora M407DRAFT_78353 N
M408DRAFT_34303 Serendipita vermifera M408DRAFT_34303 N
M413DRAFT_232462 Hebeloma cylindrosporum M413DRAFT_232462 N
M422DRAFT_84080 Sphaerobolus stellatus M422DRAFT_84080 N
MAC_00870 Metarhizium acridum MAC_00870 I
MAJ_03937 Metarhizium majus MAJ_03937 I
MAM_03270 Metarhizium album MAM_03270 I
MANI_016891 Metarhizium anisopliae MANI_016891 I
MBR_08061 Metarhizium brunneum MBR_08061 I
MGU_03543 Metarhizium guizhouense MGU_03543 I
Moror_376 Moniliophthora roreri Moror_376 I
MPER_01714 Moniliophthora perniciosa MPER_01714 I
NechaG67451 Fusarium solani NechaG67451 I
PAXRUDRAFT_30646 Paxillus rubicundulus PAXRUDRAFT_30646 N
PFICI_02800 Pestalotiopsis fici PFICI_02800 I
PHACADRAFT_246479 Phanerochaete carnosa PHACADRAFT_246479 N
PHLGIDRAFT_129508 Phlebiopsis gigantea PHLGIDRAFT_129508 N
PIIN_04121 Piriformospora indica PIIN_04121 N
PILCRDRAFT_818339 Piloderma croceum PILCRDRAFT_818339 N
PISMIDRAFT_69441 Pisolithus microcarpus PISMIDRAFT_69441 N
PISMIDRAFT_70573 Pisolithus microcarpus PISMIDRAFT_70573 N
POSPLDRAFT_93814 Postia placenta POSPLDRAFT_93814 I
SCHCODRAFT_79748 Schizophyllum commune SCHCODRAFT_79748 N
SCLCIDRAFT_18203 Scleroderma citrinum SCLCIDRAFT_18203 N
SERLA73DRAFT_78019 Serpula lacrymans SERLA73DRAFT_78019 N
UCREL1_7025 Eutypa lata UCREL1_7025 I
V565_015180 Rhizoctonia solani V565_015180 N
VHEMI07796 Torrubiella hemipterigena VHEMI07796 I
X797_006365 Metarhizium robertsii X797_006365 I