BGIOSGA000770 (Oryza indica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 BGIOSGA000770 T343699_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.939 0.508
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.938 0.483
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.930 0.492
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.903 0.508
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.903 0.508
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.896 0.415
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.890 0.449
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.890 0.449
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.875 0.390
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.875 0.390
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.875 0.390
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.865 0.390
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.865 0.390
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.865 0.407
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.865 0.390
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.851 0.364
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA000770-PA TCP 54 171

Links

Other TCP family TFs
Other Oryza indica TFs

407 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_05630 Beauveria bassiana BBA_05630 N 0.000
CCM_04623 Cordyceps militaris CCM_04623 N 0.000
CFIO01_08239 Colletotrichum fioriniae CFIO01_08239 N 0.000
CGGC5_5177 Colletotrichum gloeosporioides CGGC5_5177 N 0.000
CH063_01997 Colletotrichum higginsianum CH063_01997 N 0.000
Cob_09844 Colletotrichum orbiculare Cob_09844 N 0.000
CSUB01_01955 Colletotrichum sublineola CSUB01_01955 N 0.000
e_gw1.2.1437.1 Nectria haematococca e_gw1.2.1437.1 N 0.000
FFUJ_06104 Fusarium fujikuroi FFUJ_06104 N 0.000
fgenesh1_kg.C_scaffold_15000017 Cryphonectria parasitica fgenesh1_kg.C_scaffold_15000017 N 0.000
FGRRES_08397 Fusarium graminearum FGRRES_08397 N 0.000
FOXG_03196 Fusarium oxysporum FOXG_03196 N 0.000
FPSE_09014 Fusarium pseudograminearum FPSE_09014 N 0.000
FVEG_02065 Fusarium verticillioides FVEG_02065 N 0.000
MAC_03499 Metarhizium acridum MAC_03499 N 0.000
MAM_00759 Metarhizium album MAM_00759 N 0.000
MANI_028548 Metarhizium anisopliae MANI_028548 N 0.000
MGU_00497 Metarhizium guizhouense MGU_00497 N 0.000
NechaG35170 Fusarium solani NechaG35170 N 0.000
OCS_03494 Ophiocordyceps sinensis OCS_03494 N 0.000
S40285_07596 Stachybotrys chlorohalonata S40285_07596 N 0.000
S40288_03002 Stachybotrys chartarum S40288_03002 N 0.000
TRIVIDRAFT_76678 Trichoderma virens TRIVIDRAFT_76678 N 0.000
UCRPA7_4653 Togninia minima UCRPA7_4653 N 0.000
VDAG_05574 Verticillium dahliae VDAG_05574 N 0.000
VDBG_08003 Verticillium alfalfae VDBG_08003 N 0.000
VDBG_08003 Verticillium albo atrum VDBG_08003 N 0.000
VHEMI06839 Torrubiella hemipterigena VHEMI06839 N 0.000