Bo1g019520 (Brassica oleracea)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Bo1g019520 T343721_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.968 0.836
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.967 0.820
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.958 0.719
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.892 0.375
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.885 0.352
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.885 0.352
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.885 0.352
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.882 0.375
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.882 0.375
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.875 0.383
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.851 0.359
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.850 0.344
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.844 0.359
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.844 0.359
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g019520.1 TCP 49 176

Links

Other TCP family TFs
Other Brassica oleracea TFs

421 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010404 Ailuropoda melanoleuca ENSAMEG00000010404 N
ADNP2 Bos taurus ENSBTAG00000005916 N
ADNP2 Canis familiaris ENSCAFG00000000007 N
ADNP2 Choloepus hoffmanni ENSCHOG00000012944 N
ADNP2 Callithrix jacchus ENSCJAG00000010119 N
ENSCPOG00000005011 Cavia porcellus ENSCPOG00000005011 N
ENSCSAG00000018257 Chlorocebus sabaeus ENSCSAG00000018257 N
ADNP2 Dasypus novemcinctus ENSDNOG00000003747 N
ADNP2 Equus caballus ENSECAG00000008310 N
ADNP2 Felis catus ENSFCAG00000022677 N
ADNP2 Gorilla gorilla ENSGGOG00000003551 N
ADNP2 Loxodonta africana ENSLAFG00000001597 N
ENSMEUG00000007373 Macropus eugenii ENSMEUG00000007373 N
ADNP2 Myotis lucifugus ENSMLUG00000006751 N
ADNP2 Macaca mulatta ENSMMUG00000013710 N
ENSMMUP00000018027 Macaca fascicularis ENSMMUP00000018027 N
ADNP2 Monodelphis domestica ENSMODG00000011929 N
ENSMPUG00000016665 Mustela putorius furo ENSMPUG00000016665 N
Adnp2 Mus musculus ENSMUSG00000053950 N
ENSNLEG00000008406 Nomascus leucogenys ENSNLEG00000008406 N
ENSOARG00000004037 Ovis aries ENSOARG00000004037 N
ADNP2 Oryctolagus cuniculus ENSOCUG00000009233 N
ADNP2 Otolemur garnettii ENSOGAG00000032513 N
ADNP2 Ochotona princeps ENSOPRG00000000455 N
ENSPANG00000011713 Papio anubis ENSPANG00000011713 N
ENSPPYG00000009265 Pongo abelii ENSPPYG00000009265 N
ADNP2 Pan troglodytes ENSPTRG00000010138 N
ADNP2 Pteropus vampyrus ENSPVAG00000009159 N
Adnp2 Rattus norvegicus ENSRNOG00000053370 N
ENSSHAG00000005235 Sarcophilus harrisii ENSSHAG00000005235 N
ENSSSCG00000005774 Sus scrofa ENSSSCG00000005774 N
ENSSTOG00000025747 Ictidomys tridecemlineatus ENSSTOG00000025747 N
ADNP2 Tupaia belangeri ENSTBEG00000001298 N
ADNP2 Tursiops truncatus ENSTTRG00000002400 N
ADNP2 Vicugna pacos ENSVPAG00000001203 N
Myotis_brandtii_ADNP2_10034220 Myotis brandtii Myotis_brandtii_ADNP2_10034220 N