GSMUA_Achr2G12990_001 (Musa acuminata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GSMUA_Achr2G12990_001 T343958_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.930 0.548
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.919 0.519
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.919 0.519
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.902 0.500
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.893 0.462
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.893 0.510
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.890 0.462
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.889 0.442
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.889 0.442
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.889 0.442
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.887 0.471
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.879 0.471
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.879 0.471
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.873 0.462
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.855 0.442
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.855 0.442
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr2P12990_001 TCP 69 207

Links

Other TCP family TFs
Other Musa acuminata TFs

446 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009401 Calypte anna Aan_R009401 I 0.000
Afo_R013761 Aptenodytes forsteri Afo_R013761 I 0.000
Brh_R009359 Buceros rhinoceros Brh_R009359 I 0.000
Cmyd_10017122 Chelonia mydas Cmyd_10017122 I 0.000
ENSAMXG00000025867 Astyanax mexicanus ENSAMXG00000025867 I 0.000
ENSAPLG00000001864 Anas platyrhynchos ENSAPLG00000001864 I 0.000
ZBTB26 Bos taurus ENSBTAG00000038610 I 0.000
ENSBTAP00000040938-D2 Bos grunniens ENSBTAP00000040938-D2 I 0.000
ENSBTAP00000052774-D5 Bos grunniens ENSBTAP00000052774-D5 I 0.000
ZBTB26 Callithrix jacchus ENSCJAG00000021770 I 0.000
ENSCSAG00000019712 Chlorocebus sabaeus ENSCSAG00000019712 I 0.000
ZBTB26 Danio rerio ENSDARG00000028949 I 0.000
ZBTB26 Dasypus novemcinctus ENSDNOG00000045813 I 0.000
ZBTB26 Equus caballus ENSECAG00000017397 I 0.000
ZBTB26 Echinops telfairi ENSETEG00000009868 I 0.000
ENSFALG00000014341 Ficedula albicollis ENSFALG00000014341 I 0.000
ZBTB26 Homo sapiens ENSG00000171448 D 0.000
si:ch211-236k19.4 Gasterosteus aculeatus ENSGACG00000013351 I 0.000
ENSGALG00000001236 Gallus gallus ENSGALG00000001236 I 0.000
ZBTB26 Gorilla gorilla ENSGGOG00000015134 I 0.000
ENSGMOG00000002798 Gadus morhua ENSGMOG00000002798 I 0.000
ZBTB26 Loxodonta africana ENSLAFG00000012394 I 0.000
ENSLOCG00000002911 Lepisosteus oculatus ENSLOCG00000002911 I 0.000
ENSMEUG00000015636 Macropus eugenii ENSMEUG00000015636 I 0.000
ZBTB26 Myotis lucifugus ENSMLUG00000014009 I 0.000
ZBTB26 Macaca mulatta ENSMMUG00000000495 I 0.000
ZBTB26 Monodelphis domestica ENSMODG00000023552 I 0.000
ENSMPUG00000019237 Mustela putorius furo ENSMPUG00000019237 I 0.000
Zbtb26 Mus musculus ENSMUSG00000050714 I 0.000
ENSNLEG00000017215 Nomascus leucogenys ENSNLEG00000017215 I 0.000
ENSOARG00000019156 Ovis aries ENSOARG00000019156 I 0.000
ZBTB26 Otolemur garnettii ENSOGAG00000010685 I 0.000
ENSONIG00000020657 Oreochromis niloticus ENSONIG00000020657 I 0.000
ZBTB26 Ochotona princeps ENSOPRG00000013334 I 0.000
si:ch211-236k19.4 Oryzias latipes ENSORLG00000015695 I 0.000
ENSP00000362760 Macaca fascicularis ENSP00000362760 I 0.000
ENSPANG00000025839 Papio anubis ENSPANG00000025839 I 0.000
ZBTB26 Procavia capensis ENSPCAG00000010332 I 0.000
ENSPFOG00000001590 Poecilia formosa ENSPFOG00000001590 I 0.000
ENSPPYG00000019585 Pongo abelii ENSPPYG00000019585 I 0.000
ENSPSIG00000001041 Pelodiscus sinensis ENSPSIG00000001041 I 0.000
ZBTB26 Pan troglodytes ENSPTRG00000021341 I 0.000
ZBTB26 Pteropus vampyrus ENSPVAG00000017595 I 0.000
Zbtb26 Rattus norvegicus ENSRNOG00000009346 I 0.000
ENSSHAG00000008190 Sarcophilus harrisii ENSSHAG00000008190 I 0.000
ENSSSCG00000005577 Sus scrofa ENSSSCG00000005577 I 0.000
ENSSSCG00000005580 Sus scrofa ENSSSCG00000005580 I 0.000
ENSSTOG00000004739 Ictidomys tridecemlineatus ENSSTOG00000004739 I 0.000
ZBTB26 Taeniopygia guttata ENSTGUG00000018200 I 0.000
si:ch211-236k19.4 Tetraodon nigroviridis ENSTNIG00000011438 I 0.000
ZBTB26 Tursiops truncatus ENSTTRG00000016957 I 0.000
ENSXMAG00000019575 Xiphophorus maculatus ENSXMAG00000019575 I 0.000
Gfo_R007917 Geospiza fortis Gfo_R007917 I 0.000
Myotis_brandtii_ZBTB26_10028431 Myotis brandtii Myotis_brandtii_ZBTB26_10028431 I 0.000
Ogr13905 Ophisaurus gracilis Ogr13905 I 0.000
Pvit_08508 Pogona vitticeps Pvit_08508 I 0.000
Tal_R003614 Tyto alba Tal_R003614 I 0.000
zbtb26 Xenopus tropicalis XB-GENE-5891654 I 0.000