GSMUA_Achr6G14430_001 (Musa acuminata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GSMUA_Achr6G14430_001 T343975_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.935 0.567
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.933 0.567
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.933 0.529
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.933 0.529
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.933 0.529
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.929 0.567
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.872 0.423
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.870 0.433
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.870 0.433
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.867 0.433
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.845 0.413
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.845 0.413
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.834 0.394
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.831 0.413
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr6P14430_001 TCP 55 227

Links

Other TCP family TFs
Other Musa acuminata TFs

404 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R007949 Calypte anna Aan_R007949 N 0.000
Afo_R006305 Aptenodytes forsteri Afo_R006305 N 0.000
Brh_R011091 Buceros rhinoceros Brh_R011091 N 0.000
Cmyd_10013756 Chelonia mydas Cmyd_10013756 N 0.000
ENSAMEG00000011610 Ailuropoda melanoleuca ENSAMEG00000011610 N 0.000
ENSAPLG00000008758 Anas platyrhynchos ENSAPLG00000008758 N 0.000
ARNTL2 Bos taurus ENSBTAG00000011804 N 0.000
ENSCSAG00000007636 Chlorocebus sabaeus ENSCSAG00000007636 N 0.000
ENSFALG00000003942 Ficedula albicollis ENSFALG00000003942 N 0.000
ARNTL2 Homo sapiens ENSG00000029153 N 0.000
ARNTL2 Gallus gallus ENSGALG00000014096 N 0.000
ARNTL2 Meleagris gallopavo ENSMGAG00000013735 N 0.000
ARNTL2 Macaca mulatta ENSMMUG00000023249 N 0.000
ENSMPUG00000010512 Mustela putorius furo ENSMPUG00000010512 N 0.000
ENSNLEG00000005463 Nomascus leucogenys ENSNLEG00000005463 N 0.000
ENSOARG00000019779 Ovis aries ENSOARG00000019779 N 0.000
ENSP00000266503 Macaca fascicularis ENSP00000266503 N 0.000
ENSPANG00000004474 Papio anubis ENSPANG00000004474 N 0.000
ARNTL2 Procavia capensis ENSPCAG00000008486 N 0.000
ENSPPYG00000004380 Pongo abelii ENSPPYG00000004380 N 0.000
ENSPSIG00000009416 Pelodiscus sinensis ENSPSIG00000009416 N 0.000
ARNTL2 Pan troglodytes ENSPTRG00000004788 N 0.000
ARNTL2 Pteropus vampyrus ENSPVAG00000013771 N 0.000
ENSTGUG00000012163 Taeniopygia guttata ENSTGUG00000012163 N 0.000
ENSTSYG00000005541 Tarsius syrichta ENSTSYG00000005541 N 0.000
ARNTL2 Tursiops truncatus ENSTTRG00000012339 N 0.000
Gfo_R015185 Geospiza fortis Gfo_R015185 N 0.000
Tal_R011603 Tyto alba Tal_R011603 N 0.000