CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS01G0755500
(
Oryza sativa
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
OS01G0755500
T344225_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS01G0213800
M11398_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF5_01
0.909
0.600
TCP4
M02514_2.00
Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV
PBM
Weirauch et al.(2014)
pTH9313
0.886
0.600
PK10344.1
M01313_2.00
Cannabis sativa
GGGACCAC
GTGGTCCC
PBM
Lambert et al.(2019)
pTH11464
0.884
0.505
TCP4
M02501_2.00
Arabidopsis thaliana
GGGACCAC
GTGGTCCC
PBM
Weirauch et al.(2014)
pTH8084
0.883
0.600
TCP3
M02500_2.00
Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN
PBM
Weirauch et al.(2014)
pTH8835
0.879
0.568
TCP3
M07274_2.00
Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH
Dap-seq
OMalley et al.(2016)
TCP3_colamp_a
0.879
0.568
TCP3
M07275_2.00
Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH
Dap-seq
OMalley et al.(2016)
TCP3_col
0.879
0.568
LjT20A21.20.nc
M02519_2.00
Lotus japonicus
GGGACCAY
RTGGTCCC
PBM
Weirauch et al.(2014)
pTH9202
0.872
0.474
TCP13
M07283_2.00
Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
PTF1_col_a
0.872
0.516
TCP13
M07284_2.00
Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN
Dap-seq
OMalley et al.(2016)
PTF1_colamp_a
0.872
0.516
TCP5
M02510_2.00
Arabidopsis lyrata
GGGACCAC
GTGGTCCC
PBM
Weirauch et al.(2014)
pTH9233
0.839
0.453
TCP5
M02505_2.00
Arabidopsis thaliana
GGGACCAY
RTGGTCCC
PBM
Weirauch et al.(2014)
pTH7523
0.838
0.474
TCP2
M02503_2.00
Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN
PBM
Weirauch et al.(2014)
pTH8198
0.836
0.463
TCP2
M02508_2.00
Arabidopsis lyrata
GGSMCCAC
GTGGKSCC
PBM
Weirauch et al.(2014)
pTH9231
0.833
0.442
TCP17
M07290_2.00
Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
TCP17_col_a
0.822
0.453
TCP17
M07291_2.00
Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY
Dap-seq
OMalley et al.(2016)
TCP17_colamp_a
0.822
0.453
For this family, TFs with SR scores >
0.822
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS01T0755500-01
TCP
127
339
AGRKDRHSKVCTARGLRDRRVRLAAHTAIRFYDVQDRLGYDRPSKAVDWLMRNAKAAIDELPDRAEAPPPPAAASTEQPEATEQATSTSYGFGNTTGGTMTSAASAAAGSFLPHSLGADRVSDSVKSLFPSSSTASGAASAGHDEYRGSPPDLLSRTTSNQQPQELCLTLQSNQHQIFSHVSSNHHGMISSAGVPGWPDHSQRMQAWHAPENS
Links
Other
TCP
family TFs
Other
Oryza sativa
TFs
389 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R008070
Calypte anna
Aan_R008070
I
ENSAMEG00000019654
Ailuropoda melanoleuca
ENSAMEG00000019654
I
ZBTB43
Bos taurus
ENSBTAG00000003438
I
ENSBTAP00000004465-D1
Bos grunniens
ENSBTAP00000004465-D1
I
ZBTB43
Callithrix jacchus
ENSCJAG00000017939
I
ENSCSAG00000019711
Chlorocebus sabaeus
ENSCSAG00000019711
I
ENSDORG00000001810
Dipodomys ordii
ENSDORG00000001810
I
ZBTB43
Equus caballus
ENSECAG00000013239
I
ZBTB43
Erinaceus europaeus
ENSEEUG00000009258
I
ZBTB43
Echinops telfairi
ENSETEG00000000019
I
ZBTB43
Felis catus
ENSFCAG00000031874
I
ZBTB43
Homo sapiens
ENSG00000169155
D
ZBTB43
Gorilla gorilla
ENSGGOG00000017180
I
ZBTB43
Loxodonta africana
ENSLAFG00000011314
I
ZBTB43
Myotis lucifugus
ENSMLUG00000010893
I
ZBTB43
Macaca mulatta
ENSMMUG00000013640
I
ENSMPUG00000019227
Mustela putorius furo
ENSMPUG00000019227
I
Zbtb43
Mus musculus
ENSMUSG00000026788
I
ENSNLEG00000017415
Nomascus leucogenys
ENSNLEG00000017415
I
ENSOARG00000012600
Ovis aries
ENSOARG00000012600
I
ZBTB43
Oryctolagus cuniculus
ENSOCUG00000009799
I
ZBTB43
Otolemur garnettii
ENSOGAG00000002029
I
ZBTB43
Ochotona princeps
ENSOPRG00000011453
I
ENSP00000362556
Macaca fascicularis
ENSP00000362556
I
ENSPANG00000000295
Papio anubis
ENSPANG00000000295
I
ZBTB43
Procavia capensis
ENSPCAG00000006897
I
ENSPPYG00000019615
Pongo abelii
ENSPPYG00000019615
I
ZBTB43
Pan troglodytes
ENSPTRG00000021378
I
ZBTB43
Pteropus vampyrus
ENSPVAG00000017706
I
Zbtb43
Rattus norvegicus
ENSRNOG00000017017
I
ZBTB43
Sorex araneus
ENSSARG00000013849
I
ENSSSCG00000029288
Sus scrofa
ENSSSCG00000029288
I
ENSSTOG00000007435
Ictidomys tridecemlineatus
ENSSTOG00000007435
I
ZBTB43
Tursiops truncatus
ENSTTRG00000009614
I