PGSC0003DMG400026568 (Solanum tuberosum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 PGSC0003DMG400026568 T344272_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.905 0.471
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.908 0.534
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.903 0.471
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.886 0.466
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.884 0.413
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.866 0.397
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.871 0.505
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.871 0.505
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.852 0.388
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.852 0.421
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.853 0.456
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.852 0.421
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.853 0.456
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.853 0.456
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.852 0.437
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400068331 TCP 34 162
PGSC0003DMT400068332 TCP 34 184

Links

Other TCP family TFs
Other Solanum tuberosum TFs

385 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_06056 Arthroderma benhamiae ARB_06056 N
BDDG_07814 Blastomyces dermatitidis BDDG_07814 N
ACLA_060680 Aspergillus clavatus CADACLAG00006069 N
CADAFLAG00008613 Aspergillus flavus CADAFLAG00008613 N
AFUA_3G04070 Aspergillus fumigatus CADAFUAG00000375 N
CADANGAG00000016 Aspergillus niger CADANGAG00000016 N
ANIA_09397 Aspergillus nidulans CADANIAG00001184 N
CADAORAG00011876 Aspergillus oryzae CADAORAG00011876 N
ATEG_02862 Aspergillus terreus CADATEAG00010270 N
NFIA_006380 Neosartorya fischeri CADNFIAG00000086 N
CIMG_08455 Coccidioides immitis CIMG_08455 N
CPC735_061230 Coccidioides posadasii CPC735_061230 N
EURHEDRAFT_524848 Aspergillus ruber EURHEDRAFT_524848 N
fgenesh1_pm.00771_#_439 Aspergillus carbonarius fgenesh1_pm.00771_#_439 N
H102_02756 Trichophyton rubrum H102_02756 N
H105_02773 Trichophyton soudanense H105_02773 N
HCBG_08372 Histoplasma capsulatum HCBG_08372 N
MCYG_02773 Microsporum canis MCYG_02773 N
MCYG_02773 Arthroderma otae MCYG_02773 N
PAAG_01538 Paracoccidioides sp lutzii PAAG_01538 N
PABG_03595 Paracoccidioides brasiliensis PABG_03595 N
PCH_Pc14g00630 Penicillium rubens PCH_Pc14g00630 N
PDE_01436 Penicillium oxalicum PDE_01436 N
PDIP_67820 Penicillium digitatum PDIP_67820 N
PEX1_026460 Penicillium expansum PEX1_026460 N
PITC_090510 Penicillium italicum PITC_090510 N
PMAA_005670 Penicillium marneffei PMAA_005670 N
PMAA_005670 Talaromyces marneffei PMAA_005670 N
PVAR5_4424 Byssochlamys spectabilis PVAR5_4424 N
TEQG_04142 Trichophyton equinum TEQG_04142 N
TESG_01805 Trichophyton tonsurans TESG_01805 N
TRV_08126 Trichophyton verrucosum TRV_08126 N
TSTA_104270 Talaromyces stipitatus TSTA_104270 N
U727_00433631381 Penicillium solitum U727_00433631381 N
UREG_02530 Uncinocarpus reesii UREG_02530 N