VIT_19s0014g01680 (Vitis vinifera)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 VIT_19s0014g01680 T344504_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.959 0.622
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.959 0.622
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.956 0.555
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.956 0.555
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.956 0.555
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.940 0.521
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.898 0.437
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.895 0.429
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.887 0.412
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.876 0.387
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.856 0.378
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.848 0.345
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.845 0.387
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.845 0.387
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_19s0014g01680.t01 TCP 38 250

Links

Other TCP family TFs
Other Vitis vinifera TFs

422 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R002493 Aptenodytes forsteri Afo_R002493 I 0.000
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I 0.000
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.000
Cmyd_10015219 Chelonia mydas Cmyd_10015219 I 0.000
D915_08967 Fasciola hepatica D915_08967 I 0.000
ENSAPLG00000008031 Anas platyrhynchos ENSAPLG00000008031 I 0.000
RBPJL Bos taurus ENSBTAG00000011283 I 0.000
RBPJL Canis familiaris ENSCAFG00000009670 I 0.000
ENSCHOG00000000749 Choloepus hoffmanni ENSCHOG00000000749 I 0.000
RBPJL Callithrix jacchus ENSCJAG00000017526 I 0.000
RBPJL Cavia porcellus ENSCPOG00000020407 I 0.000
ENSCSAG00000014350 Chlorocebus sabaeus ENSCSAG00000014350 I 0.000
RBPJL Dasypus novemcinctus ENSDNOG00000011919 I 0.000
RBPJL Equus caballus ENSECAG00000013463 I 0.000
RBPJL Erinaceus europaeus ENSEEUG00000013039 I 0.000
RBPJL Echinops telfairi ENSETEG00000005066 I 0.000
ENSFALG00000005428 Ficedula albicollis ENSFALG00000005428 I 0.000
RBPJL Felis catus ENSFCAG00000009812 I 0.000
RBPJL Homo sapiens ENSG00000124232 I 0.000
RBPJ Homo sapiens ENSG00000168214 D 0.000
RBPJL Gallus gallus ENSGALG00000003952 I 0.000
RBPJL Gorilla gorilla ENSGGOG00000004147 I 0.000
RBPJL Loxodonta africana ENSLAFG00000008148 I 0.000
RBPJL Meleagris gallopavo ENSMGAG00000017264 I 0.000
RBPJL Microcebus murinus ENSMICG00000014225 I 0.000
RBPJL Myotis lucifugus ENSMLUG00000005893 I 0.000
RBPJL Macaca mulatta ENSMMUG00000003404 I 0.000
RBPJL Monodelphis domestica ENSMODG00000016187 I 0.000
ENSMPUG00000017637 Mustela putorius furo ENSMPUG00000017637 I 0.000
Rbpjl Mus musculus ENSMUSG00000017007 D 0.000
ENSOARG00000005105 Ovis aries ENSOARG00000005105 I 0.000
RBPJL Oryctolagus cuniculus ENSOCUG00000009087 I 0.000
RBPJL Otolemur garnettii ENSOGAG00000024900 I 0.000
ENSP00000341243 Macaca fascicularis ENSP00000341243 I 0.000
ENSP00000341243-D1 Bos grunniens ENSP00000341243-D1 I 0.000
ENSPANG00000024780 Papio anubis ENSPANG00000024780 I 0.000
RBPJL Pan troglodytes ENSPTRG00000013542 I 0.000
RBPJL Pteropus vampyrus ENSPVAG00000008751 I 0.000
ENSSHAG00000013207 Sarcophilus harrisii ENSSHAG00000013207 I 0.000
ENSSTOG00000009296 Ictidomys tridecemlineatus ENSSTOG00000009296 I 0.000
RBPJL Taeniopygia guttata ENSTGUG00000005009 I 0.000
RBPJL Tursiops truncatus ENSTTRG00000013806 I 0.000
ENSVPAG00000005031 Vicugna pacos ENSVPAG00000005031 I 0.000
Gfo_R005402 Geospiza fortis Gfo_R005402 I 0.000
GLOINDRAFT_27407 Rhizophagus irregularis GLOINDRAFT_27407 N 0.000
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.000
Myotis_brandtii_RBPJL_10002478 Myotis brandtii Myotis_brandtii_RBPJL_10002478 I 0.000
SCUD_0000326701 Schistosoma curassoni SCUD_0000326701 I 0.000
Sjc_0108400 Schistosoma japonicum Sjc_0108400 I 0.000
SMRZ_0000802101 Schistosoma margrebowiei SMRZ_0000802101 I 0.000
SMTD_0001089601 Schistosoma mattheei SMTD_0001089601 I 0.000
TRE_0000568701 Trichobilharzia regenti TRE_0000568701 I 0.000