Ca_13216 (Cicer arietinum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Ca_13216 T344513_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.937 0.488
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.936 0.433
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.935 0.488
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.900 0.441
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.900 0.441
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.894 0.402
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.894 0.402
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.893 0.441
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.891 0.394
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.879 0.417
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.876 0.409
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.873 0.370
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.873 0.370
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.873 0.370
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.872 0.370
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.865 0.362
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_13216 TCP 31 296

Links

Other TCP family TFs
Other Cicer arietinum TFs

431 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_01545 Beauveria bassiana BBA_01545 N 0.000
BGHDH14_bgh04116 Blumeria graminis BGHDH14_bgh04116 N 0.000
CADANGAG00002230 Aspergillus niger CADANGAG00002230 N 0.000
CCM_00998 Cordyceps militaris CCM_00998 N 0.000
CH063_07308 Colletotrichum higginsianum CH063_07308 N 0.000
Cob_01816 Colletotrichum orbiculare Cob_01816 N 0.000
CPUR_00596 Claviceps purpurea CPUR_00596 N 0.000
CSUB01_04200 Colletotrichum sublineola CSUB01_04200 N 0.000
CTHT_0020070 Chaetomium thermophilum CTHT_0020070 N 0.000
EFA75025.1 Polysphondylium pallidum EFA75025.1 N 0.000
estExt_fgenesh1_kg.C_80107 Cryphonectria parasitica estExt_fgenesh1_kg.C_80107 N 0.000
estExt_Genewise1.C_90051 Neurospora discreta estExt_Genewise1.C_90051 N 0.000
FFUJ_13265 Fusarium fujikuroi FFUJ_13265 N 0.000
FGRRES_06071 Fusarium graminearum FGRRES_06071 N 0.000
FOXG_07781 Fusarium oxysporum FOXG_07781 N 0.000
FPSE_04226 Fusarium pseudograminearum FPSE_04226 N 0.000
FVEG_04708 Fusarium verticillioides FVEG_04708 N 0.000
GLRG_10810 Colletotrichum graminicola GLRG_10810 N 0.000
MAC_09480 Metarhizium acridum MAC_09480 N 0.000
MAJ_05808 Metarhizium majus MAJ_05808 N 0.000
MAM_04763 Metarhizium album MAM_04763 N 0.000
MANI_012588 Metarhizium anisopliae MANI_012588 N 0.000
MBR_03064 Metarhizium brunneum MBR_03064 N 0.000
MGU_04765 Metarhizium guizhouense MGU_04765 N 0.000
MPH_12253 Macrophomina phaseolina MPH_12253 N 0.000
MYCTH_2305929 Myceliophthora thermophila MYCTH_2305929 N 0.000
NCAS_0C02550 Naumovozyma castellii NCAS_0C02550 N 0.000
NCU05891 Neurospora crassa NCU05891 N 0.000
NechaG60026 Fusarium solani NechaG60026 N 0.000
NEUTE1DRAFT_86802 Neurospora tetrasperma NEUTE1DRAFT_86802 N 0.000
OCS_06782 Ophiocordyceps sinensis OCS_06782 N 0.000
S40285_02142 Stachybotrys chlorohalonata S40285_02142 N 0.000
S40288_01911 Stachybotrys chartarum S40288_01911 N 0.000
Scas_Contig562.2 Saccharomyces castellii Scas_Contig562.2 N 0.000
SMAC_08547 Sordaria macrospora SMAC_08547 N 0.000
SNOG_12221 Phaeosphaeria nodorum SNOG_12221 N 0.000
SNOG_12221 Stagonospora nodorum SNOG_12221 N 0.000
THITE_2067650 Thielavia terrestris THITE_2067650 N 0.000
TRIATDRAFT_161664 Trichoderma atroviride TRIATDRAFT_161664 N 0.000
TRIREDRAFT_77609 Trichoderma reesei TRIREDRAFT_77609 N 0.000
TRIVIDRAFT_36951 Trichoderma virens TRIVIDRAFT_36951 N 0.000
UCRPA7_6046 Togninia minima UCRPA7_6046 N 0.000
UREG_07450 Uncinocarpus reesii UREG_07450 N 0.000
UV8b_5421 Ustilaginoidea virens UV8b_5421 N 0.000
VDAG_09953 Verticillium dahliae VDAG_09953 N 0.000
VDBG_03434 Verticillium alfalfae VDBG_03434 N 0.000
VDBG_03434 Verticillium albo atrum VDBG_03434 N 0.000
X797_001129 Metarhizium robertsii X797_001129 N 0.000