Cla020670 (Citrullus lanatus)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Cla020670 T344548_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02499_2.00 		Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337 		0.929 0.336
TCP24
M02506_2.00 		Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227 		0.929 0.336
TCP24
M07272_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a 		0.929 0.336
TCP24
M07273_2.00 		Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col 		0.929 0.336
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla020670 TCP 145 237
Cla020670 TCP 209 267

Links

Other TCP family TFs
Other Citrullus lanatus TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30072.m000986 Ricinus communis 30072.m000986 N
ATMYBL2 Arabidopsis thaliana AT1G71030 N
BGIOSGA002691 Oryza indica BGIOSGA002691 N
Bra016164 Brassica rapa Bra016164 N
Cagra.0147s0041 Capsella grandiflora Cagra.0147s0041 N
Carubv10020983m.g Capsella rubella Carubv10020983m.g N
Ca_11427 Cicer arietinum Ca_11427 N
ATMYBL2 Arabidopsis lyrata fgenesh2_kg.2__1365__AT1G71030.1 N
MDP0000581761 Malus domestica MDP0000581761 N
mgf018170m Mimulus guttatus mgf018170m N
OBART01G01770 Oryza barthii OBART01G01770 N
OBART01G27550 Oryza barthii OBART01G27550 N
OGLUM01G01950 Oryza glumaepatula OGLUM01G01950 N
ONIVA01G01950 Oryza nivara ONIVA01G01950 N
OPUNC01G01540 Oryza punctata OPUNC01G01540 N
OS01G0127450 Oryza sativa OS01G0127450 N