Pm024946 (Prunus mume)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Pm024946 T344565_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.957 0.456
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.954 0.463
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.929 0.381
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.923 0.401
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.923 0.401
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.887 0.333
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.884 0.347
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.884 0.347
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.874 0.320
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.852 0.306
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.842 0.299
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.841 0.293
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.841 0.293
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.841 0.293
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.838 0.286
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.838 0.286
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm024946 TCP 58 213

Links

Other TCP family TFs
Other Prunus mume TFs

391 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA002833 Oryza indica BGIOSGA002833 N 0.000
BRADI2G03830 Brachypodium distachyon BRADI2G03830 I 0.000
BRADI2G34600 Brachypodium distachyon BRADI2G34600 N 0.000
evm.TU.supercontig_21.7 Carica papaya evm.TU.supercontig_21.7 N 0.000
F775_00759 Aegilops tauschii F775_00759 N 0.000
F775_01873 Aegilops tauschii F775_01873 N 0.000
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.000
Gorai.011G034000 Gossypium raimondii Gorai.011G034000 I 0.000
GRMZM2G088443 Zea mays GRMZM2G088443 I 0.000
GRMZM2G369629 Zea mays GRMZM2G369629 N 0.000
LPERR01G03590 Leersia perrieri LPERR01G03590 I 0.000
LPERR05G03980 Leersia perrieri LPERR05G03980 N 0.000
MLOC_69121 Hordeum vulgare MLOC_69121 N 0.000
OB01G13800 Oryza brachyantha OB01G13800 N 0.000
OB05G14140 Oryza brachyantha OB05G14140 N 0.000
OBART01G03950 Oryza barthii OBART01G03950 N 0.000
OBART05G04450 Oryza barthii OBART05G04450 N 0.000
OGLUM01G04250 Oryza glumaepatula OGLUM01G04250 N 0.000
OGLUM05G04370 Oryza glumaepatula OGLUM05G04370 N 0.000
OLONG_015419 Oryza longistaminata OLONG_015419 N 0.000
OMERI01G03850 Oryza meridionalis OMERI01G03850 N 0.000
OMERI05G04410 Oryza meridionalis OMERI05G04410 N 0.000
ONIVA01G04390 Oryza nivara ONIVA01G04390 N 0.000
OPUNC01G03610 Oryza punctata OPUNC01G03610 N 0.000
OPUNC05G04080 Oryza punctata OPUNC05G04080 N 0.000
ORGLA01G0034700 Oryza glaberrima ORGLA01G0034700 N 0.000
ORGLA05G0041400 Oryza glaberrima ORGLA05G0041400 N 0.000
ORUFI01G04050 Oryza rufipogon ORUFI01G04050 N 0.000
ORUFI05G04670 Oryza rufipogon ORUFI05G04670 N 0.000
OS05G0163900 Oryza sativa OS05G0163900 N 0.000
Pavir.Ca01107 Panicum virgatum Pavir.Ca01107 I 0.000
Pavir.Ea00439 Panicum virgatum Pavir.Ea00439 I 0.000
Pavir.J32610 Panicum virgatum Pavir.J32610 N 0.000
PDK_20s1551661g004 Phoenix dactylifera PDK_20s1551661g004 N 0.000
Sb03g005250 Sorghum bicolor Sb03g005250 N 0.000
Sb09g004820 Sorghum bicolor Sb09g004820 N 0.000
Si002655m.g Setaria italica Si002655m.g I 0.000
Si012213m.g Setaria italica Si012213m.g N 0.000
TCM_029711 Theobroma cacao TCM_029711 I 0.000
TRAES3BF130100030CFD_g Triticum aestivum TRAES3BF130100030CFD_g N 0.000
Traes_1AS_96F0745A2 Triticum aestivum Traes_1AS_96F0745A2 N 0.000
Traes_1BS_1F372BED3 Triticum aestivum Traes_1BS_1F372BED3 N 0.000
Traes_1DS_CD79239C8 Triticum aestivum Traes_1DS_CD79239C8 N 0.000
Traes_3B_2DF1A6E5B Triticum aestivum Traes_3B_2DF1A6E5B N 0.000
TRIUR3_07421 Triticum urartu TRIUR3_07421 N 0.000
TRIUR3_12818 Triticum urartu TRIUR3_12818 N 0.000
TRIUR3_21807 Triticum urartu TRIUR3_21807 N 0.000