Cucsa.113300 (Cucumis sativus)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Cucsa.113300 T344635_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.923 0.536
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.918 0.577
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.915 0.608
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.896 0.536
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.896 0.536
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.874 0.443
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.872 0.526
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.872 0.526
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.855 0.433
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.851 0.433
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.850 0.443
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.850 0.443
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.850 0.443
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.837 0.423
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.837 0.412
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.835 0.443
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.113300.1 TCP 27 123

Links

Other TCP family TFs
Other Cucumis sativus TFs

375 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_07754 Capronia epimyces A1O3_07754 I
BAUCODRAFT_45255 Baudoinia compniacensis BAUCODRAFT_45255 N
BBA_07071 Beauveria bassiana BBA_07071 I
CFIO01_07975 Colletotrichum fioriniae CFIO01_07975 I
CGGC5_14706 Colletotrichum gloeosporioides CGGC5_14706 I
CH063_11393 Colletotrichum higginsianum CH063_11393 I
COCMIDRAFT_22555 Bipolaris oryzae COCMIDRAFT_22555 I
COCVIDRAFT_20649 Bipolaris victoriae COCVIDRAFT_20649 I
CSUB01_12509 Colletotrichum sublineola CSUB01_12509 I
EURHEDRAFT_509629 Aspergillus ruber EURHEDRAFT_509629 N
e_gw1.17.466.1 Nectria haematococca e_gw1.17.466.1 I
FIBRA_03539 Fibroporia radiculosa FIBRA_03539 I
G647_00858 Cladophialophora carrionii G647_00858 I
GALMADRAFT_249209 Galerina marginata GALMADRAFT_249209 I
GLRG_00281 Colletotrichum graminicola GLRG_00281 I
GLRG_05504 Colletotrichum graminicola GLRG_05504 I
M378DRAFT_197822 Amanita muscaria M378DRAFT_197822 I
M413DRAFT_441943 Hebeloma cylindrosporum M413DRAFT_441943 I
Moror_6819 Moniliophthora roreri Moror_6819 I
NechaG46033 Fusarium solani NechaG46033 I
PAXRUDRAFT_132889 Paxillus rubicundulus PAXRUDRAFT_132889 I
PILCRDRAFT_51 Piloderma croceum PILCRDRAFT_51 I
PLEOSDRAFT_158391 Pleurotus ostreatus PLEOSDRAFT_158391 I
PV05_04579 Exophiala xenobiotica PV05_04579 N
PV07_03849 Cladophialophora immunda PV07_03849 N
PV10_06359 Exophiala mesophila PV10_06359 I
SERLA73DRAFT_159962 Serpula lacrymans SERLA73DRAFT_159962 I
SPAPADRAFT_61489 Spathaspora passalidarum SPAPADRAFT_61489 I
SPOG_02829 Schizosaccharomyces cryophilus SPOG_02829 I
TRIREDRAFT_53106 Trichoderma reesei TRIREDRAFT_53106 I
TRIVIDRAFT_133401 Trichoderma virens TRIVIDRAFT_133401 I
TSTA_122850 Talaromyces stipitatus TSTA_122850 I
Z519_04194 Cladophialophora bantiana Z519_04194 I