Bostr.1460s0130 (Boechera stricta)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Bostr.1460s0130 T344706_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.950 0.602
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.950 0.602
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.931 0.534
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.918 0.475
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.918 0.492
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.902 0.458
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.902 0.458
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.896 0.449
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.888 0.441
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.884 0.449
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.884 0.449
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.884 0.449
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.879 0.424
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.875 0.415
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.855 0.398
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.855 0.398
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.1460s0130.1.p TCP 72 237

Links

Other TCP family TFs
Other Boechera stricta TFs

425 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB04817.1 Alternaria brassicicola AB04817.1 I 0.000
AB08968.1 Alternaria brassicicola AB08968.1 I 0.000
ACRE_056860 Acremonium chrysogenum ACRE_056860 I 0.000
AOL_s00079g257 Arthrobotrys oligospora AOL_s00079g257 I 0.000
AOL_s00215g64 Arthrobotrys oligospora AOL_s00215g64 I 0.000
BAUCODRAFT_23289 Baudoinia compniacensis BAUCODRAFT_23289 I 0.000
BBA_06721 Beauveria bassiana BBA_06721 I 0.000
Bcin06g02160 Botrytis cinerea Bcin06g02160 I 0.000
BGHDH14_bgh00909 Blumeria graminis BGHDH14_bgh00909 I 0.000
CADAFLAG00007235 Aspergillus flavus CADAFLAG00007235 I 0.000
AFUA_2G02540 Aspergillus fumigatus CADAFUAG00003598 I 0.000
CADANGAG00005877 Aspergillus niger CADANGAG00005877 I 0.000
ANIA_04562 Aspergillus nidulans CADANIAG00005876 D 0.000
ATEG_06925 Aspergillus terreus CADATEAG00003197 I 0.000
CCM_03249 Cordyceps militaris CCM_03249 I 0.000
CFIO01_10839 Colletotrichum fioriniae CFIO01_10839 I 0.000
CH063_04138 Colletotrichum higginsianum CH063_04138 I 0.000
CH063_06068 Colletotrichum higginsianum CH063_06068 I 0.000
CHGG_06554 Chaetomium globosum CHGG_06554 I 0.000
CMQ_2600 Grosmannia clavigera CMQ_2600 I 0.000
CMQ_4918 Grosmannia clavigera CMQ_4918 I 0.000
Cob_04988 Colletotrichum orbiculare Cob_04988 I 0.000
COCC4DRAFT_125759 Bipolaris maydis COCC4DRAFT_125759 I 0.000
COCC4DRAFT_173684 Bipolaris maydis COCC4DRAFT_173684 I 0.000
COCCADRAFT_29461 Bipolaris zeicola COCCADRAFT_29461 I 0.000
COCCADRAFT_4209 Bipolaris zeicola COCCADRAFT_4209 I 0.000
COCMIDRAFT_100501 Bipolaris oryzae COCMIDRAFT_100501 I 0.000
COCMIDRAFT_108054 Bipolaris oryzae COCMIDRAFT_108054 I 0.000
COCSADRAFT_250469 Bipolaris sorokiniana COCSADRAFT_250469 I 0.000
COCSADRAFT_86485 Bipolaris sorokiniana COCSADRAFT_86485 I 0.000
COCVIDRAFT_105819 Bipolaris victoriae COCVIDRAFT_105819 I 0.000
COCVIDRAFT_20419 Bipolaris victoriae COCVIDRAFT_20419 I 0.000
COCVIDRAFT_30018 Bipolaris victoriae COCVIDRAFT_30018 I 0.000
CSUB01_03547 Colletotrichum sublineola CSUB01_03547 I 0.000
CTHT_0012120 Chaetomium thermophilum CTHT_0012120 I 0.000
DOTSEDRAFT_48303 Dothistroma septosporum DOTSEDRAFT_48303 I 0.000
DRE_03900 Drechslerella stenobrocha DRE_03900 I 0.000
EPUS_04235 Endocarpon pusillum EPUS_04235 I 0.000
EPUS_07397 Endocarpon pusillum EPUS_07397 I 0.000
estExt_fgenesh3_kg.C_20222 Neurospora discreta estExt_fgenesh3_kg.C_20222 I 0.000
estExt_Genewise1Plus.C_130082 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_130082 I 0.000
estExt_Genewise1Plus.C_40021 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_40021 I 0.000
estExt_Genewise1Plus.C_sca_2_chr3_3_01039 Nectria haematococca estExt_Genewise1Plus.C_sca_2_chr3_3_01039 I 0.000
EURHEDRAFT_405475 Aspergillus ruber EURHEDRAFT_405475 I 0.000
e_gw1.00771.352.1 Aspergillus carbonarius e_gw1.00771.352.1 I 0.000
F503_06201 Ophiostoma piceae uamh F503_06201 I 0.000
FFUJ_06219 Fusarium fujikuroi FFUJ_06219 I 0.000
FGRRES_13313_M Fusarium graminearum FGRRES_13313_M I 0.000
FPSE_11731 Fusarium pseudograminearum FPSE_11731 I 0.000
FVEG_01956 Fusarium verticillioides FVEG_01956 I 0.000
GGTG_00856 Gaeumannomyces graminis GGTG_00856 I 0.000
GGTG_04663 Gaeumannomyces graminis GGTG_04663 I 0.000
GLRG_02502 Colletotrichum graminicola GLRG_02502 I 0.000
GMDG_07872 Pseudogymnoascus destructans GMDG_07872 I 0.000
GSTUM_00002563001 Tuber melanosporum GSTUM_00002563001 I 0.000
H072_3382 Dactylellina haptotyla H072_3382 I 0.000
H072_4550 Dactylellina haptotyla H072_4550 I 0.000
HMPREF1624_04787 Sporothrix schenckii HMPREF1624_04787 I 0.000
LEMA_P070240.1 Leptosphaeria maculans LEMA_P070240.1 I 0.000
LEMA_P113690.1 Leptosphaeria maculans LEMA_P113690.1 I 0.000
MAC_00870 Metarhizium acridum MAC_00870 I 0.000
MAJ_03937 Metarhizium majus MAJ_03937 I 0.000
MAM_03270 Metarhizium album MAM_03270 I 0.000
MANI_016891 Metarhizium anisopliae MANI_016891 I 0.000
MAPG_07612 Magnaporthe poae MAPG_07612 I 0.000
MAPG_10727 Magnaporthe poae MAPG_10727 I 0.000
MBM_06265 Marssonina brunnea MBM_06265 I 0.000
MBR_08061 Metarhizium brunneum MBR_08061 I 0.000
MGU_03543 Metarhizium guizhouense MGU_03543 I 0.000
MYCTH_2298160 Myceliophthora thermophila MYCTH_2298160 I 0.000
NCU01994 Neurospora crassa NCU01994 D 0.000
NechaG67451 Fusarium solani NechaG67451 I 0.000
NEUTE1DRAFT_89466 Neurospora tetrasperma NEUTE1DRAFT_89466 I 0.000
OIDMADRAFT_110220 Oidiodendron maius OIDMADRAFT_110220 I 0.000
PAAG_01282 Paracoccidioides sp lutzii PAAG_01282 I 0.000
PABG_01850 Paracoccidioides brasiliensis PABG_01850 I 0.000
PDE_05394 Penicillium oxalicum PDE_05394 I 0.000
PFICI_02800 Pestalotiopsis fici PFICI_02800 I 0.000
PFICI_10263 Pestalotiopsis fici PFICI_10263 I 0.000
PTRG_01651 Pyrenophora triticirepentis PTRG_01651 I 0.000
PTRG_07150 Pyrenophora triticirepentis PTRG_07150 I 0.000
PTT_06950 Pyrenophora teres PTT_06950 I 0.000
PTT_08596 Pyrenophora teres PTT_08596 I 0.000
PV04_10908 Capronia semiimmersa PV04_10908 I 0.000
PVAR5_0698 Byssochlamys spectabilis PVAR5_0698 I 0.000
PVAR5_6135 Byssochlamys spectabilis PVAR5_6135 I 0.000
S40285_06845 Stachybotrys chlorohalonata S40285_06845 I 0.000
S40285_07743 Stachybotrys chlorohalonata S40285_07743 I 0.000
S40288_03446 Stachybotrys chartarum S40288_03446 I 0.000
SAPIO_CDS6640 Scedosporium apiospermum SAPIO_CDS6640 I 0.000
SBOR_5107 Sclerotinia borealis SBOR_5107 I 0.000
SEPMUDRAFT_112186 Sphaerulina musiva SEPMUDRAFT_112186 I 0.000
SETTUDRAFT_111603 Setosphaeria turcica SETTUDRAFT_111603 I 0.000
SETTUDRAFT_18242 Setosphaeria turcica SETTUDRAFT_18242 I 0.000
SMAC_05437 Sordaria macrospora SMAC_05437 I 0.000
SNOG_00166 Stagonospora nodorum SNOG_00166 I 0.000
SNOG_00166 Phaeosphaeria nodorum SNOG_00166 I 0.000
SS1G_02552 Sclerotinia sclerotiorum SS1G_02552 I 0.000
THITE_2109887 Thielavia terrestris THITE_2109887 I 0.000
THITE_2111586 Thielavia terrestris THITE_2111586 I 0.000
TRIATDRAFT_300980 Trichoderma atroviride TRIATDRAFT_300980 I 0.000
TRIREDRAFT_74576 Trichoderma reesei TRIREDRAFT_74576 I 0.000
TRIVIDRAFT_150786 Trichoderma virens TRIVIDRAFT_150786 I 0.000
UCREL1_7025 Eutypa lata UCREL1_7025 I 0.000
UCREL1_8518 Eutypa lata UCREL1_8518 I 0.000
UCRNP2_115 Neofusicoccum parvum UCRNP2_115 I 0.000
UCRPA7_4629 Togninia minima UCRPA7_4629 I 0.000
UCRPA7_5501 Togninia minima UCRPA7_5501 I 0.000
UV8b_1784 Ustilaginoidea virens UV8b_1784 I 0.000
V499_08520 Pseudogymnoascus pannorum V499_08520 I 0.000
VHEMI07796 Torrubiella hemipterigena VHEMI07796 I 0.000
W97_07866 Coniosporium apollinis W97_07866 I 0.000
X797_006365 Metarhizium robertsii X797_006365 I 0.000