Eucgr.F01204 (Eucalyptus grandis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Eucgr.F01204 T344800_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.952 0.454
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.950 0.447
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.950 0.447
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.950 0.447
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.949 0.447
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.946 0.468
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.900 0.383
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.891 0.369
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.891 0.369
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.873 0.333
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.847 0.355
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.841 0.291
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.839 0.319
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.839 0.319
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F01204.1 TCP 41 184

Links

Other TCP family TFs
Other Eucalyptus grandis TFs

419 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_04608 Capronia epimyces A1O3_04608 N
CaO19.13413 Candida albicans CaO19.13413 N
CaO19.5992 Candida albicans CaO19.5992 N
CCM_08254 Cordyceps militaris CCM_08254 N
CD36_85150 Candida dubliniensis CD36_85150 N
CFIO01_10586 Colletotrichum fioriniae CFIO01_10586 N
CH063_11092 Colletotrichum higginsianum CH063_11092 N
CH063_12034 Colletotrichum higginsianum CH063_12034 N
CLUG_05915 Candida lusitaniae CLUG_05915 N
CLUG_05915 Clavispora lusitaniae CLUG_05915 N
COCCADRAFT_83759 Bipolaris zeicola COCCADRAFT_83759 N
COCMIDRAFT_97135 Bipolaris oryzae COCMIDRAFT_97135 N
COCSADRAFT_156072 Bipolaris sorokiniana COCSADRAFT_156072 N
COCVIDRAFT_106561 Bipolaris victoriae COCVIDRAFT_106561 N
CSUB01_04728 Colletotrichum sublineola CSUB01_04728 N
CTRG_02521 Candida tropicalis CTRG_02521 N
CTRG_03975 Candida tropicalis CTRG_03975 N
DOTSEDRAFT_68927 Dothistroma septosporum DOTSEDRAFT_68927 N
estExt_fgenesh1_pg.C_150042 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_150042 N
G210_4588 Candida maltosa G210_4588 N
GLRG_03456 Colletotrichum graminicola GLRG_03456 N
HMPREF1120_05968 Exophiala dermatitidis HMPREF1120_05968 N
MAM_05054 Metarhizium album MAM_05054 I
MGG_08093 Magnaporthe oryzae MGG_08093 I
MGG_17623 Magnaporthe oryzae MGG_17623 N
PODANS_4_2530 Podospora anserina PODANS_4_2530 I
SAKL0D14916g Lachancea kluyveri SAKL0D14916g I
SOCG_02136 Schizosaccharomyces octosporus SOCG_02136 N
SPOG_00690 Schizosaccharomyces cryophilus SPOG_00690 N
VDAG_01478 Verticillium dahliae VDAG_01478 I
VDBG_04249 Verticillium alfalfae VDBG_04249 I
VDBG_04249 Verticillium albo atrum VDBG_04249 I
VHEMI00428 Torrubiella hemipterigena VHEMI00428 I
YALI0_D06193g Yarrowia lipolytica YALI0_D06193g N