MDP0000534647 (Malus domestica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 MDP0000534647 T344952_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.910 0.446
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.887 0.420
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.884 0.420
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.884 0.420
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.878 0.411
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.877 0.420
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.877 0.420
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.822 0.366
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000534647 TCP 90 279

Links

Other TCP family TFs
Other Malus domestica TFs

183 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AOL_s00083g513 Arthrobotrys oligospora AOL_s00083g513 N 0.000
BBA_01545 Beauveria bassiana BBA_01545 N 0.000
BGHDH14_bgh04116 Blumeria graminis BGHDH14_bgh04116 N 0.000
ACLA_039280 Aspergillus clavatus CADACLAG00003549 N 0.000
CADANGAG00002230 Aspergillus niger CADANGAG00002230 N 0.000
CIMG_03690 Coccidioides immitis CIMG_03690 N 0.000
COCC4DRAFT_204146 Bipolaris maydis COCC4DRAFT_204146 N 0.000
COCCADRAFT_91234 Bipolaris zeicola COCCADRAFT_91234 N 0.000
COCMIDRAFT_4549 Bipolaris oryzae COCMIDRAFT_4549 N 0.000
COCSADRAFT_277515 Bipolaris sorokiniana COCSADRAFT_277515 N 0.000
COCVIDRAFT_107914 Bipolaris victoriae COCVIDRAFT_107914 N 0.000
CPC735_005930 Coccidioides posadasii CPC735_005930 N 0.000
CTHT_0020070 Chaetomium thermophilum CTHT_0020070 N 0.000
estExt_fgenesh1_pg.C_260064 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_260064 N 0.000
H072_9133 Dactylellina haptotyla H072_9133 N 0.000
LEMA_P095580.1 Leptosphaeria maculans LEMA_P095580.1 N 0.000
MAM_04763 Metarhizium album MAM_04763 N 0.000
MGG_03319 Magnaporthe oryzae MGG_03319 N 0.000
OIDMADRAFT_162843 Oidiodendron maius OIDMADRAFT_162843 N 0.000
PDE_04763 Penicillium oxalicum PDE_04763 N 0.000
PNEG_03153 Pneumocystis murina PNEG_03153 N 0.000
PredSwiss_ASS2010_3776.1 Pneumocystis carinii PredSwiss_ASS2010_3776.1 N 0.000
PredSwiss_CON2738.2 Pneumocystis carinii PredSwiss_CON2738.2 N 0.000
PredSwiss_CON3214.2 Pneumocystis carinii PredSwiss_CON3214.2 N 0.000
PredSwiss_CON858.1 Pneumocystis carinii PredSwiss_CON858.1 N 0.000
PredSwiss_EST252.1 Pneumocystis carinii PredSwiss_EST252.1 N 0.000
PTRG_03338 Pyrenophora triticirepentis PTRG_03338 N 0.000
PTT_12885 Pyrenophora teres PTT_12885 N 0.000
SETTUDRAFT_183195 Setosphaeria turcica SETTUDRAFT_183195 N 0.000
THITE_2067650 Thielavia terrestris THITE_2067650 N 0.000
TRIATDRAFT_161664 Trichoderma atroviride TRIATDRAFT_161664 N 0.000
TSTA_027260 Talaromyces stipitatus TSTA_027260 N 0.000
VHEMI07914 Torrubiella hemipterigena VHEMI07914 N 0.000