Pavir.J15913 (Panicum virgatum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Pavir.J15913 T345018_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.947 0.682
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.938 0.671
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.935 0.671
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.928 0.565
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.902 0.518
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.902 0.518
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.892 0.600
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.892 0.600
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.885 0.588
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.885 0.588
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.879 0.529
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.876 0.529
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.873 0.529
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.873 0.529
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.873 0.529
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.845 0.482
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J15913.1.p TCP 43 129

Links

Other TCP family TFs
Other Panicum virgatum TFs

425 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_03167 Capronia coronata A1O1_03167 I
A1O3_01925 Capronia epimyces A1O3_01925 I
A1O7_04497 Cladophialophora yegresii A1O7_04497 I
A1O9_00939 Exophiala aquamarina A1O9_00939 I
A1Q1_07087 Trichosporon asahii A1Q1_07087 I
AB06842.1 Alternaria brassicicola AB06842.1 I
ACRE_033300 Acremonium chrysogenum ACRE_033300 I
ACRE_055860 Acremonium chrysogenum ACRE_055860 I
AGABI2DRAFT_191917 Agaricus bisporus AGABI2DRAFT_191917 I
AMAG_06832 Allomyces macrogynus AMAG_06832 N
AOL_s00075g120 Arthrobotrys oligospora AOL_s00075g120 I
AUEXF2481DRAFT_414412 Aureobasidium subglaciale AUEXF2481DRAFT_414412 I
AWRI1499_3213 Brettanomyces bruxellensis AWRI1499_3213 I
BAUCODRAFT_49676 Baudoinia compniacensis BAUCODRAFT_49676 I
BBA_04813 Beauveria bassiana BBA_04813 I
Bcin09g00920 Botrytis cinerea Bcin09g00920 I
BDDG_06376 Blastomyces dermatitidis BDDG_06376 I
BGHDH14_bgh04237 Blumeria graminis BGHDH14_bgh04237 I
BN946_scf185043.g203 Trametes cinnabarina BN946_scf185043.g203 I
ACLA_039220 Aspergillus clavatus CADACLAG00003763 I
CADAFLAG00002509 Aspergillus flavus CADAFLAG00002509 I
AFUA_3G11330 Aspergillus fumigatus CADAFUAG00005023 I
CADANGAG00002223 Aspergillus niger CADANGAG00002223 I
ANIA_02911 Aspergillus nidulans CADANIAG00010178 I
CADAORAG00001285 Aspergillus oryzae CADAORAG00001285 I
NFIA_065970 Neosartorya fischeri CADNFIAG00005978 I
CAOG_06753 Capsaspora owczarzaki CAOG_06753 I
CapteG125951 Capitella teleta CapteG125951 I
CC1G_00462 Coprinopsis cinerea CC1G_00462 I
CCM_09124 Cordyceps militaris CCM_09124 I
CERSUDRAFT_111539 Ceriporiopsis subvermispora CERSUDRAFT_111539 I
CFIO01_09498 Colletotrichum fioriniae CFIO01_09498 I
CGGC5_15082 Colletotrichum gloeosporioides CGGC5_15082 I
CH063_00485 Colletotrichum higginsianum CH063_00485 I
CHGG_00632 Chaetomium globosum CHGG_00632 I
CIMG_03698 Coccidioides immitis CIMG_03698 I
CLEC003972 Cimex lectularius CLEC003972 I
CMQ_683 Grosmannia clavigera CMQ_683 I
CNB05690 Cryptococcus neoformans CNB05690 I
Cob_09423 Colletotrichum orbiculare Cob_09423 I
COCC4DRAFT_39469 Bipolaris maydis COCC4DRAFT_39469 I
COCCADRAFT_110849 Bipolaris zeicola COCCADRAFT_110849 I
COCMIDRAFT_100301 Bipolaris oryzae COCMIDRAFT_100301 I
COCSADRAFT_216676 Bipolaris sorokiniana COCSADRAFT_216676 I
COCVIDRAFT_84814 Bipolaris victoriae COCVIDRAFT_84814 I
CPUR_07883 Claviceps purpurea CPUR_07883 I
CSUB01_02787 Colletotrichum sublineola CSUB01_02787 I
CTHT_0051900 Chaetomium thermophilum CTHT_0051900 I
CY34DRAFT_741442 Suillus luteus CY34DRAFT_741442 I
DACRYDRAFT_24992 Dacryopinax sp DACRYDRAFT_24992 I
DOTSEDRAFT_70140 Dothistroma septosporum DOTSEDRAFT_70140 I
E5Q_04894 Mixia osmundae E5Q_04894 I
EDP42815.1 Malassezia globosa EDP42815.1 I
atf2/7 Ciona intestinalis ENSCING00000006645 I
EPUS_07920 Endocarpon pusillum EPUS_07920 I
estExt_fgenesh1_pg.C_130141 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_130141 I
estExt_fgenesh1_pg.C_150134 Monosiga brevicollis estExt_fgenesh1_pg.C_150134 I
estExt_fgenesh1_pg.C_150146 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_150146 I
estExt_fgenesh1_pm.C_chr_10233 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_10233 I
estExt_fgenesh2_pg.C_10593 Neurospora discreta estExt_fgenesh2_pg.C_10593 I
estExt_fgeneshMC_pg.C_20944 Mucor circinelloides estExt_fgeneshMC_pg.C_20944 I
estExt_fgeneshMC_pg.C_50959 Mucor circinelloides estExt_fgeneshMC_pg.C_50959 I
estExt_fgeneshPB_pg.C_340044 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_340044 I
estExt_Genewise1.C_41601 Heterobasidion annosum estExt_Genewise1.C_41601 I
estExt_Genewise1.C_71204 Cryphonectria parasitica estExt_Genewise1.C_71204 I
estExt_Genewise1Plus.C_sca_5_chr5_3_00629 Nectria haematococca estExt_Genewise1Plus.C_sca_5_chr5_3_00629 I
EURHEDRAFT_81548 Aspergillus ruber EURHEDRAFT_81548 I
EV44_g5736 Erysiphe necator EV44_g5736 I
F503_00157 Ophiostoma piceae uamh F503_00157 I
FFUJ_07310 Fusarium fujikuroi FFUJ_07310 I
fgenesh1_pg.00866_#_392 Aspergillus carbonarius fgenesh1_pg.00866_#_392 I
fgenesh1_pg.C_scaffold_2000291 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000291 I
fgeneshMC_pg.13_#_37 Mucor circinelloides fgeneshMC_pg.13_#_37 I
fgeneshMC_pg.1_#_1383 Mucor circinelloides fgeneshMC_pg.1_#_1383 I
fgeneshMC_pg.1_#_1409 Mucor circinelloides fgeneshMC_pg.1_#_1409 I
fgeneshMC_pg.3_#_1354 Mucor circinelloides fgeneshMC_pg.3_#_1354 I
fgeneshMC_pg.6_#_568 Mucor circinelloides fgeneshMC_pg.6_#_568 I
fgeneshMC_pg.7_#_563 Mucor circinelloides fgeneshMC_pg.7_#_563 I
fgeneshMC_pg.8_#_226 Mucor circinelloides fgeneshMC_pg.8_#_226 I
fgeneshPB_pg.18__184 Phycomyces blakesleeanus fgeneshPB_pg.18__184 N
fgeneshPB_pg.27__110 Phycomyces blakesleeanus fgeneshPB_pg.27__110 I
fgeneshPB_pg.4__354 Phycomyces blakesleeanus fgeneshPB_pg.4__354 I
fgeneshPB_pg.5__109 Phycomyces blakesleeanus fgeneshPB_pg.5__109 I
fgeneshPB_pg.6__495 Phycomyces blakesleeanus fgeneshPB_pg.6__495 I
fgeneshTM_pg.15_#_170 Tremella mesenterica fgeneshTM_pg.15_#_170 I
FGRRES_10142 Fusarium graminearum FGRRES_10142 I
FOMPIDRAFT_162112 Fomitopsis pinicola FOMPIDRAFT_162112 I
FOXG_05265 Fusarium oxysporum FOXG_05265 I
FOXG_07028 Fusarium oxysporum FOXG_07028 I
FOXG_07083 Fusarium oxysporum FOXG_07083 I
FOXG_07100 Fusarium oxysporum FOXG_07100 I
FPSE_02636 Fusarium pseudograminearum FPSE_02636 I
FVEG_02866 Fusarium verticillioides FVEG_02866 I
G647_04191 Cladophialophora carrionii G647_04191 I
GALMADRAFT_205475 Galerina marginata GALMADRAFT_205475 I
GGTG_00729 Gaeumannomyces graminis GGTG_00729 I
GLOINDRAFT_28660 Rhizophagus irregularis GLOINDRAFT_28660 I
GLOTRDRAFT_136480 Gloeophyllum trabeum GLOTRDRAFT_136480 I
GLRG_04311 Colletotrichum graminicola GLRG_04311 I
GMDG_05754 Pseudogymnoascus destructans GMDG_05754 I
GSTUM_00002889001 Tuber melanosporum GSTUM_00002889001 I
H072_1333 Dactylellina haptotyla H072_1333 I
HCBG_06790 Histoplasma capsulatum HCBG_06790 I
HETIRDRAFT_473165 Heterobasidion irregulare HETIRDRAFT_473165 I
HMPREF1120_06731 Exophiala dermatitidis HMPREF1120_06731 I
HMPREF1541_01690 Cyphellophora europaea HMPREF1541_01690 I
HMPREF1624_04302 Sporothrix schenckii HMPREF1624_04302 I
J056_000237 Wallemia ichthyophaga J056_000237 I
JAAARDRAFT_52880 Jaapia argillacea JAAARDRAFT_52880 I
JL09_g3709 Pichia kudriavzevii JL09_g3709 I
K437DRAFT_253963 Tilletiaria anomala K437DRAFT_253963 I
K443DRAFT_84795 Laccaria amethystina K443DRAFT_84795 I
L804_02374 Cryptococcus gattii L804_02374 I
LACBIDRAFT_312016 Laccaria bicolor LACBIDRAFT_312016 I
LEMA_P001490.1 Leptosphaeria maculans LEMA_P001490.1 I
M378DRAFT_938054 Amanita muscaria M378DRAFT_938054 I
M407DRAFT_17240 Tulasnella calospora M407DRAFT_17240 I
M408DRAFT_52746 Serendipita vermifera M408DRAFT_52746 I
M437DRAFT_75856 Aureobasidium melanogenum M437DRAFT_75856 I
M438DRAFT_184342 Aureobasidium pullulans M438DRAFT_184342 I
M7I_5710 Glarea lozoyensis M7I_5710 I
MAJ_05238 Metarhizium majus MAJ_05238 I
MAM_05099 Metarhizium album MAM_05099 I
MAPG_05500 Magnaporthe poae MAPG_05500 I
MBM_07911 Marssonina brunnea MBM_07911 I
MBR_04276 Metarhizium brunneum MBR_04276 I
MELLADRAFT_106426 Melampsora laricipopulina MELLADRAFT_106426 I
MGG_08212 Magnaporthe oryzae MGG_08212 I
MGU_04987 Metarhizium guizhouense MGU_04987 I
Moror_1610 Moniliophthora roreri Moror_1610 I
MPH_10839 Macrophomina phaseolina MPH_10839 I
MVLG_01037 Microbotryum violaceum MVLG_01037 I
MYCFIDRAFT_97819 Pseudocercospora fijiensis MYCFIDRAFT_97819 I
Mycgr3G98304 Zymoseptoria tritici Mycgr3G98304 I
asl-1 Neurospora crassa NCU01345 D
NechaG69482 Fusarium solani NechaG69482 I
NEUTE1DRAFT_57442 Neurospora tetrasperma NEUTE1DRAFT_57442 I
OIDMADRAFT_24756 Oidiodendron maius OIDMADRAFT_24756 I
PAAG_01945 Paracoccidioides sp lutzii PAAG_01945 I
PABG_02218 Paracoccidioides brasiliensis PABG_02218 I
PaG_04331 Pseudozyma aphidis PaG_04331 I
PAN0_139d6799 Pseudozyma antarctica PAN0_139d6799 I
PAS_chr1-1_0165 Komagataella pastoris PAS_chr1-1_0165 I
PAXRUDRAFT_131463 Paxillus rubicundulus PAXRUDRAFT_131463 I
Pc13g09580 Penicillium chrysogenum Pc13g09580 I
PCH_Pc13g09580 Penicillium rubens PCH_Pc13g09580 I
PDE_04903 Penicillium oxalicum PDE_04903 I
PDIP_29710 Penicillium digitatum PDIP_29710 I
PEX1_106440 Penicillium expansum PEX1_106440 I
PFICI_13363 Pestalotiopsis fici PFICI_13363 I
PFL1_04831 Pseudozyma flocculosa PFL1_04831 I
PGTG_22530 Puccinia graminis PGTG_22530 I
PHACADRAFT_81811 Phanerochaete carnosa PHACADRAFT_81811 I
PHLGIDRAFT_294586 Phlebiopsis gigantea PHLGIDRAFT_294586 I
PHSY_000323 Pseudozyma hubeiensis PHSY_000323 I
PIIN_07540 Piriformospora indica PIIN_07540 I
PILCRDRAFT_68867 Piloderma croceum PILCRDRAFT_68867 I
PISMIDRAFT_535672 Pisolithus microcarpus PISMIDRAFT_535672 I
PITC_062200 Penicillium italicum PITC_062200 I
PLEOSDRAFT_1092726 Pleurotus ostreatus PLEOSDRAFT_1092726 I
PMAA_023170 Talaromyces marneffei PMAA_023170 I
PMAA_023170 Penicillium marneffei PMAA_023170 I
PODANS_2_1280 Podospora anserina PODANS_2_1280 I
POSPLDRAFT_93466 Postia placenta POSPLDRAFT_93466 I
PSEUBRA_SCAF23g05176 Pseudozyma brasiliensis PSEUBRA_SCAF23g05176 I
PTTG_03490 Puccinia triticina PTTG_03490 I
PTT_11563 Pyrenophora teres PTT_11563 I
PV04_04779 Capronia semiimmersa PV04_04779 I
PV05_01676 Exophiala xenobiotica PV05_01676 I
PV06_04364 Exophiala oligosperma PV06_04364 I
PV07_07561 Cladophialophora immunda PV07_07561 I
PV08_10259 Exophiala spinifera PV08_10259 I
PV09_06343 Verruconis gallopava PV09_06343 I
PV10_00096 Exophiala mesophila PV10_00096 I
PV11_05009 Exophiala sideris PV11_05009 I
PVAR5_7724 Byssochlamys spectabilis PVAR5_7724 I
RO3G_01772 Rhizopus oryzae RO3G_01772 I
RO3G_02213 Rhizopus oryzae RO3G_02213 I
RO3G_05311 Rhizopus oryzae RO3G_05311 I
RO3G_05746 Rhizopus oryzae RO3G_05746 I
RO3G_06379 Rhizopus oryzae RO3G_06379 I
RO3G_06463 Rhizopus oryzae RO3G_06463 N
RO3G_07073 Rhizopus oryzae RO3G_07073 I
RO3G_07557 Rhizopus oryzae RO3G_07557 I
RO3G_11082 Rhizopus oryzae RO3G_11082 I
RO3G_12109 Rhizopus oryzae RO3G_12109 I
RTG_00632 Rhodotorula glutinis RTG_00632 I
S40285_01279 Stachybotrys chlorohalonata S40285_01279 I
S40288_09027 Stachybotrys chartarum S40288_09027 I
SAPIO_CDS10626 Scedosporium apiospermum SAPIO_CDS10626 I
SBOR_9967 Sclerotinia borealis SBOR_9967 I
SCHCODRAFT_80526 Schizophyllum commune SCHCODRAFT_80526 I
SCLCIDRAFT_20778 Scleroderma citrinum SCLCIDRAFT_20778 I
SEPMUDRAFT_147966 Sphaerulina musiva SEPMUDRAFT_147966 I
SERLA73DRAFT_103434 Serpula lacrymans SERLA73DRAFT_103434 I
SETTUDRAFT_28157 Setosphaeria turcica SETTUDRAFT_28157 I
SJAG_00266 Schizosaccharomyces japonicus SJAG_00266 I
SJAG_01725 Schizosaccharomyces japonicus SJAG_01725 I
SMAC_04034 Sordaria macrospora SMAC_04034 I
SNAPOd2T00018494001 Oikopleura dioica SNAPOd2T00018494001 I
SNOG_05677 Stagonospora nodorum SNOG_05677 I
SNOG_05677 Phaeosphaeria nodorum SNOG_05677 I
SOCG_00021 Schizosaccharomyces octosporus SOCG_00021 I
atf1 Schizosaccharomyces pombe SPBC29B5.01 I
atf21 Schizosaccharomyces pombe SPBC2F12.09c I
SPBR_05727 Sporothrix brasiliensis SPBR_05727 I
SPOG_04456 Schizosaccharomyces cryophilus SPOG_04456 I
SPOG_04690 Schizosaccharomyces cryophilus SPOG_04690 I
SPPG_01131 Spizellomyces punctatus SPPG_01131 I
SPPG_03108 Spizellomyces punctatus SPPG_03108 I
sr16890 Sporisorium reilianum sr16890 I
SS1G_04913 Sclerotinia sclerotiorum SS1G_04913 I
THITE_2106467 Thielavia terrestris THITE_2106467 I
TRIATDRAFT_39837 Trichoderma atroviride TRIATDRAFT_39837 I
TRIREDRAFT_103372 Trichoderma reesei TRIREDRAFT_103372 I
TRIVIDRAFT_229017 Trichoderma virens TRIVIDRAFT_229017 I
TSTA_031640 Talaromyces stipitatus TSTA_031640 I
U727_00433320411 Penicillium solitum U727_00433320411 I
UCREL1_7956 Eutypa lata UCREL1_7956 I
UCRNP2_7443 Neofusicoccum parvum UCRNP2_7443 I
UCRPA7_4570 Togninia minima UCRPA7_4570 I
UHOR_09005 Ustilago hordei UHOR_09005 I
UREG_07457 Uncinocarpus reesii UREG_07457 I
UV8b_5734 Ustilaginoidea virens UV8b_5734 I
V499_05475 Pseudogymnoascus pannorum V499_05475 I
V565_052940 Rhizoctonia solani V565_052940 I
VDAG_08676 Verticillium dahliae VDAG_08676 I
VHEMI00377 Torrubiella hemipterigena VHEMI00377 I
W97_02473 Coniosporium apollinis W97_02473 I
WALSEDRAFT_69295 Wallemia sebi WALSEDRAFT_69295 I
X797_004353 Metarhizium robertsii X797_004353 I
XP_002489811.1 Pichia pastoris XP_002489811.1 I
YALI0_C16863g Yarrowia lipolytica YALI0_C16863g I
Z517_11227 Fonsecaea pedrosoi Z517_11227 I
Z518_09780 Rhinocladiella mackenziei Z518_09780 I
Z519_09652 Cladophialophora bantiana Z519_09652 I