PK10344.1 (Cannabis sativa)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 PK10344.1 T345102_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK10344.1
M01313_2.00		 Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.941 0.621
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.940 0.632
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.917 0.632
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.917 0.632
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.911 0.526
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.897 0.568
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.897 0.568
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.886 0.516
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.883 0.516
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.883 0.516
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.881 0.516
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.881 0.516
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.881 0.516
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.880 0.526
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.877 0.526
For this family, TFs with SR scores > 0.822 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01313_2.00 TCP 52 182

DNA Binding Domains

Protein ID Domain From To Sequence
PK10344.1 TCP 104 234

Links

Other TCP family TFs
Other Cannabis sativa TFs

430 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZFP69B Canis familiaris ENSCAFG00000032577 I
ZFP69B Callithrix jacchus ENSCJAG00000002952 I
ENSCSAG00000001148 Chlorocebus sabaeus ENSCSAG00000001148 I
ZFP69B Dasypus novemcinctus ENSDNOG00000017460 I
ZFP69B Equus caballus ENSECAG00000023120 I
ZFP69B Erinaceus europaeus ENSEEUG00000007942 I
ZFP69B Homo sapiens ENSG00000187801 D
ZFP69B Loxodonta africana ENSLAFG00000011022 I
ZFP69B Macaca mulatta ENSMMUG00000005836 I
ENSMPUG00000014137 Mustela putorius furo ENSMPUG00000014137 I
ENSNLEG00000012178 Nomascus leucogenys ENSNLEG00000012178 I
ZFP69B Otolemur garnettii ENSOGAG00000009114 I
ENSP00000399664 Macaca fascicularis ENSP00000399664 I
ENSPANG00000005886 Papio anubis ENSPANG00000005886 I
ZFP69B Procavia capensis ENSPCAG00000015262 I
ENSPPYG00000001489 Pongo abelii ENSPPYG00000001489 I
ZFP69B Pan troglodytes ENSPTRG00000000590 I
ZFP69B Pteropus vampyrus ENSPVAG00000010053 I
ENSSSCG00000003982 Sus scrofa ENSSSCG00000003982 I
ENSSTOG00000009229 Ictidomys tridecemlineatus ENSSTOG00000009229 I
ENSTSYG00000010669 Tarsius syrichta ENSTSYG00000010669 I
ZFP69B Vicugna pacos ENSVPAG00000003027 I