MLOC_51353 (Hordeum vulgare)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 MLOC_51353 T345555_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.966
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.898
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.882
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.882
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.868
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.868
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.868
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.868
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.842
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.763
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.645
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.632
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.644
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.627
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.592
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.592
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.627
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.592
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.566
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.610
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.593
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.539
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.576
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.539
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.539
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.526
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.526
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.576
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_51353.1 TCR/CxC 412 449
MLOC_51353.1 TCR/CxC 498 518
MLOC_51353.2 TCR/CxC 460 497
MLOC_51353.2 TCR/CxC 546 583
MLOC_51353.3 TCR/CxC 412 449
MLOC_51353.3 TCR/CxC 498 535
MLOC_51353.4 TCR/CxC 389 426
MLOC_51353.4 TCR/CxC 475 495

Links

Other TCR/CxC family TFs
Other Hordeum vulgare TFs

1214 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000019215 Ailuropoda melanoleuca ENSAMEG00000019215 N
ENSBTAP00000052188-D1 Bos grunniens ENSBTAP00000052188-D1 N
INSM2 Canis familiaris ENSCAFG00000013428 N
INSM2 Callithrix jacchus ENSCJAG00000006816 N
INSM2 Cavia porcellus ENSCPOG00000013937 N
INSM2 Dasypus novemcinctus ENSDNOG00000007824 N
ENSECAG00000024921 Equus caballus ENSECAG00000024921 N
INSM2 Felis catus ENSFCAG00000025118 N
INSM2 Homo sapiens ENSG00000168348 N
INSM2 Gorilla gorilla ENSGGOG00000008351 N
INSM2 Loxodonta africana ENSLAFG00000008242 N
ENSMPUG00000019565 Mustela putorius furo ENSMPUG00000019565 N
INSM2 Oryctolagus cuniculus ENSOCUG00000006804 N
INSM2 Otolemur garnettii ENSOGAG00000024855 N
INSM2 Procavia capensis ENSPCAG00000004250 N
ENSPPYG00000005745 Pongo abelii ENSPPYG00000005745 N
INSM2 Pan troglodytes ENSPTRG00000006267 N
INSM2 Pteropus vampyrus ENSPVAG00000003511 N
Insm2 Rattus norvegicus ENSRNOG00000007754 N
ENSSHAG00000008600 Sarcophilus harrisii ENSSHAG00000008600 N
INSM2 Sus scrofa ENSSSCG00000001949 N
ENSSTOG00000026540 Ictidomys tridecemlineatus ENSSTOG00000026540 N
ENSTGUG00000007627 Taeniopygia guttata ENSTGUG00000007627 N
ENSTSYG00000011068 Tarsius syrichta ENSTSYG00000011068 N
INSM2 Tursiops truncatus ENSTTRG00000007971 N
INSM2 Vicugna pacos ENSVPAG00000010440 N
Myotis_brandtii_INSM2_10021678 Myotis brandtii Myotis_brandtii_INSM2_10021678 N
insm2 Xenopus tropicalis XB-GENE-986609 N