Bostr.19424s0383 (Boechera stricta)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03638 (TCR) IPR005172 Bostr.19424s0383 T346012_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.987
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.987
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.961
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.961
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.961
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.961
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.921
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.908
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.868
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.750
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.658
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.645
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.618
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.618
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.618
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.618
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.618
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.579
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.579
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.579
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.566
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.566
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.566
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.566
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.566
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.553
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.539
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.539
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.19424s0383.1.p TCR/CxC 347 384
Bostr.19424s0383.1.p TCR/CxC 433 470

Links

Other TCR/CxC family TFs
Other Boechera stricta TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
15331_YLR403W Saccharomyces paradoxus 15331_YLR403W I 0.000
15714_YLR403W Saccharomyces mikatae 15714_YLR403W I 0.000
17461_YLR403W Saccharomyces bayanus 17461_YLR403W I 0.000
AACERI_AaceriAER071W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER071W I 0.000
ACRE_057400 Acremonium chrysogenum ACRE_057400 I 0.000
AGOS_AER071W Ashbya gossypii AGOS_AER071W I 0.000
AOL_s00004g580 Arthrobotrys oligospora AOL_s00004g580 I 0.000
AWRI1499_3112 Brettanomyces bruxellensis AWRI1499_3112 I 0.000
BAUCODRAFT_120448 Baudoinia compniacensis BAUCODRAFT_120448 I 0.000
BBA_01441 Beauveria bassiana BBA_01441 I 0.000
CAGL0D00682g Candida glabrata CAGL0D00682g I 0.000
CAGL0M09955g Candida glabrata CAGL0M09955g I 0.000
CANTEDRAFT_136954 Candida tenuis CANTEDRAFT_136954 I 0.000
CaO19.13374 Candida albicans CaO19.13374 I 0.000
CaO19.5953 Candida albicans CaO19.5953 I 0.000
CCM_05399 Cordyceps militaris CCM_05399 I 0.000
CD36_84830 Candida dubliniensis CD36_84830 I 0.000
CGGC5_10732 Colletotrichum gloeosporioides CGGC5_10732 I 0.000
CH063_11027 Colletotrichum higginsianum CH063_11027 I 0.000
CLUG_05237 Candida lusitaniae CLUG_05237 I 0.000
CLUG_05237 Clavispora lusitaniae CLUG_05237 I 0.000
Cob_13393 Colletotrichum orbiculare Cob_13393 I 0.000
CORT_0C01760 Candida orthopsilosis CORT_0C01760 I 0.000
CPAG_02863 Candida parapsilosis CPAG_02863 I 0.000
CPUR_03627 Claviceps purpurea CPUR_03627 I 0.000
CSUB01_03330 Colletotrichum sublineola CSUB01_03330 I 0.000
CTRG_02503 Candida tropicalis CTRG_02503 I 0.000
DEHA2D11748g Debaryomyces hansenii DEHA2D11748g I 0.000
DOTSEDRAFT_51823 Dothistroma septosporum DOTSEDRAFT_51823 I 0.000
Ecym_3253 Eremothecium cymbalariae Ecym_3253 I 0.000
estExt_fgenesh1_pg.C_90338 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_90338 I 0.000
estExt_fgenesh1_pm.C_40561 Cryphonectria parasitica estExt_fgenesh1_pm.C_40561 I 0.000
estExt_fgenesh1_pm.C_chr_10304 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_10304 I 0.000
estExt_gwp_genewisePlus_worm.C_chr_1.20975 Pichia stipitis estExt_gwp_genewisePlus_worm.C_chr_1.20975 I 0.000
FFUJ_00586 Fusarium fujikuroi FFUJ_00586 I 0.000
fgenesh1_pg.sca_1_chr1_3_0000912 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000912 I 0.000
FGRRES_15767 Fusarium graminearum FGRRES_15767 I 0.000
FOXG_00980 Fusarium oxysporum FOXG_00980 I 0.000
FPSE_00633 Fusarium pseudograminearum FPSE_00633 I 0.000
FVEG_00534 Fusarium verticillioides FVEG_00534 I 0.000
G210_2438 Candida maltosa G210_2438 I 0.000
GGTG_10100 Gaeumannomyces graminis GGTG_10100 I 0.000
GLRG_00700 Colletotrichum graminicola GLRG_00700 I 0.000
GSTUM_00008521001 Tuber melanosporum GSTUM_00008521001 I 0.000
H072_2321 Dactylellina haptotyla H072_2321 I 0.000
HPODL_00600 Ogataea parapolymorpha HPODL_00600 I 0.000
KAFR_0A05850 Kazachstania africana KAFR_0A05850 I 0.000
KLTH0D14718g Lachancea thermotolerans KLTH0D14718g I 0.000
KLTH0D14718g Kluyveromyces thermotolerans KLTH0D14718g I 0.000
KNAG_0B06200 Kazachstania naganishii KNAG_0B06200 I 0.000
Kpol_1002p4 Vanderwaltozyma polyspora Kpol_1002p4 I 0.000
Kpol_1055p71 Vanderwaltozyma polyspora Kpol_1055p71 I 0.000
KUCA_T00000649001 Kuraishia capsulata KUCA_T00000649001 I 0.000
Kwal_4156 Kluyveromyces waltii Kwal_4156 I 0.000
LALA0_S03e06964g Lachancea lanzarotensis LALA0_S03e06964g I 0.000
LELG_02885 Lodderomyces elongisporus LELG_02885 I 0.000
M7I_6817 Glarea lozoyensis M7I_6817 I 0.000
MAM_05286 Metarhizium album MAM_05286 I 0.000
MAPG_03070 Magnaporthe poae MAPG_03070 I 0.000
MGG_01209 Magnaporthe oryzae MGG_01209 I 0.000
MPH_04552 Macrophomina phaseolina MPH_04552 I 0.000
MYCFIDRAFT_215154 Pseudocercospora fijiensis MYCFIDRAFT_215154 I 0.000
Mycgr3G98356 Zymoseptoria tritici Mycgr3G98356 I 0.000
NCAS_0A02570 Naumovozyma castellii NCAS_0A02570 I 0.000
NCAS_0J01590 Naumovozyma castellii NCAS_0J01590 I 0.000
NDAI_0D04320 Naumovozyma dairenensis NDAI_0D04320 I 0.000
NechaG75301 Fusarium solani NechaG75301 I 0.000
OCS_02976 Ophiocordyceps sinensis OCS_02976 I 0.000
PAS_chr4_0169 Komagataella pastoris PAS_chr4_0169 I 0.000
PFICI_06906 Pestalotiopsis fici PFICI_06906 I 0.000
PGUG_02203 Candida guilliermondii PGUG_02203 I 0.000
PGUG_02203 Meyerozyma guilliermondii PGUG_02203 I 0.000
PICST_81274 Scheffersomyces stipitis PICST_81274 I 0.000
PNEG_01028 Pneumocystis murina PNEG_01028 I 0.000
PODANS_1_4460 Podospora anserina PODANS_1_4460 I 0.000
PredSwiss_CON3163.1 Pneumocystis carinii PredSwiss_CON3163.1 I 0.000
PredSwiss_EST880.1 Pneumocystis carinii PredSwiss_EST880.1 I 0.000
PV09_00537 Verruconis gallopava PV09_00537 I 0.000
S40285_08847 Stachybotrys chlorohalonata S40285_08847 I 0.000
S40288_02803 Stachybotrys chartarum S40288_02803 I 0.000
SAPIO_CDS1423 Scedosporium apiospermum SAPIO_CDS1423 I 0.000
Scas_Contig719.24 Saccharomyces castellii Scas_Contig719.24 I 0.000
SJAG_03241 Schizosaccharomyces japonicus SJAG_03241 I 0.000
SKUD_206617 Saccharomyces kudriavzevii SKUD_206617 I 0.000
SOCG_04198 Schizosaccharomyces octosporus SOCG_04198 I 0.000
sfp1 Schizosaccharomyces pombe SPAC16.05c I 0.000
SPOG_00344 Schizosaccharomyces cryophilus SPOG_00344 I 0.000
SU7_2383 Saccharomyces arboricola SU7_2383 I 0.000
TBLA_0I03040 Tetrapisispora blattae TBLA_0I03040 I 0.000
TPHA_0B00710 Tetrapisispora phaffii TPHA_0B00710 I 0.000
TPHA_0B02140 Tetrapisispora phaffii TPHA_0B02140 I 0.000
TRIATDRAFT_140885 Trichoderma atroviride TRIATDRAFT_140885 I 0.000
TRIREDRAFT_122680 Trichoderma reesei TRIREDRAFT_122680 I 0.000
TRIVIDRAFT_208206 Trichoderma virens TRIVIDRAFT_208206 I 0.000
UCRNP2_3551 Neofusicoccum parvum UCRNP2_3551 I 0.000
UCRPA7_5934 Togninia minima UCRPA7_5934 I 0.000
UV8b_2245 Ustilaginoidea virens UV8b_2245 I 0.000
VDBG_07384 Verticillium albo atrum VDBG_07384 I 0.000
VDBG_07384 Verticillium alfalfae VDBG_07384 I 0.000
VHEMI04961 Torrubiella hemipterigena VHEMI04961 I 0.000
W97_08713 Coniosporium apollinis W97_08713 I 0.000
X797_004862 Metarhizium robertsii X797_004862 I 0.000
XP_002493573.1 Pichia pastoris XP_002493573.1 I 0.000
YALI0_F11487g Yarrowia lipolytica YALI0_F11487g I 0.000
SFP1 Saccharomyces cerevisiae YLR403W D 0.000
ZBAI_02717 Zygosaccharomyces bailii ZBAI_02717 I 0.000
ZBAI_08964 Zygosaccharomyces bailii ZBAI_08964 I 0.000
ZYRO0B12738g Zygosaccharomyces rouxii ZYRO0B12738g I 0.000