Thhalv10001964m.g (Eutrema salsugineum)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03638 (TCR) IPR005172 Thhalv10001964m.g T346160_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.920
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.920
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.920
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.920
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.853
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.787
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.693
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.680
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.680
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.680
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.680
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.667
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.667
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.667
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.667
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.667
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.653
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.653
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.653
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.640
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.627
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.627
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.613
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.613
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.600
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.587
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.573
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.547
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10001964m TCR/CxC 94 130
Thhalv10001964m TCR/CxC 177 214

Links

Other TCR/CxC family TFs
Other Eutrema salsugineum TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R004874 Calypte anna Aan_R004874 I
Afo_R001188 Aptenodytes forsteri Afo_R001188 I
Afo_R012529 Aptenodytes forsteri Afo_R012529 I
Alligator_sinensis_CCG001816.1 Alligator sinensis Alligator_sinensis_CCG001816.1 I
Alligator_sinensis_CCG003243.1 Alligator sinensis Alligator_sinensis_CCG003243.1 I
Alligator_sinensis_CCG007409.1 Alligator sinensis Alligator_sinensis_CCG007409.1 I
Alligator_sinensis_CCG015693.1 Alligator sinensis Alligator_sinensis_CCG015693.1 I
Brh_R001055 Buceros rhinoceros Brh_R001055 I
Brh_R004937 Buceros rhinoceros Brh_R004937 I
Cmyd_10002091 Chelonia mydas Cmyd_10002091 I
Cmyd_10005057 Chelonia mydas Cmyd_10005057 I
Cmyd_10012869 Chelonia mydas Cmyd_10012869 I
CREB3L2 Anolis carolinensis ENSACAG00000011643 I
ENSAMEG00000011947 Ailuropoda melanoleuca ENSAMEG00000011947 I
ENSAMEG00000018046 Ailuropoda melanoleuca ENSAMEG00000018046 I
ENSAMXG00000001763 Astyanax mexicanus ENSAMXG00000001763 I
ENSAMXG00000011038 Astyanax mexicanus ENSAMXG00000011038 I
ENSAMXG00000012038 Astyanax mexicanus ENSAMXG00000012038 I
ENSAPLG00000012813 Anas platyrhynchos ENSAPLG00000012813 I
CREB3L4 Bos taurus ENSBTAG00000014692 I
CREB3L2 Bos taurus ENSBTAG00000015802 I
ENSBTAP00000020987-D1 Bos grunniens ENSBTAP00000020987-D1 I
CREB3L2 Canis familiaris ENSCAFG00000013481 I
CREB3L4 Canis familiaris ENSCAFG00000017395 I
CREB3L4 Choloepus hoffmanni ENSCHOG00000002522 I
CREB3L4 Callithrix jacchus ENSCJAG00000009978 I
CREB3L2 Callithrix jacchus ENSCJAG00000012834 I
CREB3L2 Cavia porcellus ENSCPOG00000008872 I
ENSCSAG00000001896 Chlorocebus sabaeus ENSCSAG00000001896 I
ENSCSAG00000008752 Chlorocebus sabaeus ENSCSAG00000008752 I
creb3l3a Danio rerio ENSDARG00000056226 I
creb3l2 Danio rerio ENSDARG00000063563 I
creb3l3b Danio rerio ENSDARG00000090903 I
CREB3L2 Dasypus novemcinctus ENSDNOG00000004102 I
CREB3L4 Dasypus novemcinctus ENSDNOG00000042769 I
Creb3l2 Dipodomys ordii ENSDORG00000002788 I
Creb3l4 Dipodomys ordii ENSDORG00000011769 I
CREB3L2 Equus caballus ENSECAG00000007609 I
CREB3L4 Equus caballus ENSECAG00000017552 I
CREB3L4 Echinops telfairi ENSETEG00000008252 I
ENSFALG00000000511 Ficedula albicollis ENSFALG00000000511 I
ENSFALG00000000900 Ficedula albicollis ENSFALG00000000900 I
CREB3L2 Felis catus ENSFCAG00000000648 I
CREB3L4 Felis catus ENSFCAG00000012586 I
CREB3L4 Homo sapiens ENSG00000143578 D
CREB3L2 Homo sapiens ENSG00000182158 I
creb3l2 Gasterosteus aculeatus ENSGACG00000020083 I
ENSGALG00000002523 Gallus gallus ENSGALG00000002523 I
CREB3L2 Gallus gallus ENSGALG00000012877 I
CREB3L2 Gorilla gorilla ENSGGOG00000004216 I
CREB3L4 Gorilla gorilla ENSGGOG00000005601 I
ENSGMOG00000010438 Gadus morhua ENSGMOG00000010438 I
ENSLACG00000008535 Latimeria chalumnae ENSLACG00000008535 I
ENSLACG00000009185 Latimeria chalumnae ENSLACG00000009185 I
CREB3L2 Loxodonta africana ENSLAFG00000008469 I
ENSLOCG00000006221 Lepisosteus oculatus ENSLOCG00000006221 I
ENSLOCG00000008658 Lepisosteus oculatus ENSLOCG00000008658 I
ENSMEUG00000013573 Macropus eugenii ENSMEUG00000013573 I
CREB3L2 Meleagris gallopavo ENSMGAG00000013250 I
CREB3L2 Microcebus murinus ENSMICG00000003960 I
CREB3L4 Microcebus murinus ENSMICG00000010316 I
CREB3L3 Myotis lucifugus ENSMLUG00000008703 I
CREB3L4 Myotis lucifugus ENSMLUG00000013291 I
CREB3L2 Myotis lucifugus ENSMLUG00000030474 I
CREB3L4 Macaca mulatta ENSMMUG00000005008 I
CREB3L3 Monodelphis domestica ENSMODG00000000817 I
CREB3L2 Monodelphis domestica ENSMODG00000013876 D
CREB3L4 Monodelphis domestica ENSMODG00000017299 I
ENSMPUG00000003955 Mustela putorius furo ENSMPUG00000003955 I
ENSMPUG00000007975 Mustela putorius furo ENSMPUG00000007975 I
Creb3l2 Mus musculus ENSMUSG00000038648 D
ENSNLEG00000010798 Nomascus leucogenys ENSNLEG00000010798 I
ENSNLEG00000026880 Nomascus leucogenys ENSNLEG00000026880 I
ENSOARG00000001743 Ovis aries ENSOARG00000001743 I
ENSOARG00000009957 Ovis aries ENSOARG00000009957 I
CREB3L2 Oryctolagus cuniculus ENSOCUG00000007313 I
CREB3L4 Oryctolagus cuniculus ENSOCUG00000011784 I
CREB3L2 Otolemur garnettii ENSOGAG00000010846 I
ENSONIG00000017874 Oreochromis niloticus ENSONIG00000017874 I
CREB3L4 Ochotona princeps ENSOPRG00000003982 I
creb3l3a Oryzias latipes ENSORLG00000004610 I
ENSP00000271889 Macaca fascicularis ENSP00000271889 I
ENSP00000271889-D1 Bos grunniens ENSP00000271889-D1 I
ENSP00000329140 Macaca fascicularis ENSP00000329140 I
ENSPANG00000006363 Papio anubis ENSPANG00000006363 I
ENSPANG00000010323 Papio anubis ENSPANG00000010323 I
CREB3L4 Procavia capensis ENSPCAG00000003143 I
CREB3L2 Procavia capensis ENSPCAG00000014875 I
ENSPFOG00000002309 Poecilia formosa ENSPFOG00000002309 I
ENSPFOG00000012285 Poecilia formosa ENSPFOG00000012285 I
ENSPPYG00000000792 Pongo abelii ENSPPYG00000000792 I
ENSPPYG00000018036 Pongo abelii ENSPPYG00000018036 I
ENSPSIG00000006461 Pelodiscus sinensis ENSPSIG00000006461 I
CREB3L4 Pan troglodytes ENSPTRG00000001368 I
CREB3L2 Pan troglodytes ENSPTRG00000019739 I
CREB3L4 Pteropus vampyrus ENSPVAG00000011092 I
Creb3l2 Rattus norvegicus ENSRNOG00000012826 I
ENSSARG00000011575 Sorex araneus ENSSARG00000011575 I
ENSSHAG00000011584 Sarcophilus harrisii ENSSHAG00000011584 I
ENSSHAG00000011761 Sarcophilus harrisii ENSSHAG00000011761 I
CREB3L4 Sus scrofa ENSSSCG00000006560 I
CREB3L2 Sus scrofa ENSSSCG00000016520 I
ENSSTOG00000009818 Ictidomys tridecemlineatus ENSSTOG00000009818 I
ENSSTOG00000014516 Ictidomys tridecemlineatus ENSSTOG00000014516 I
CREB3L2 Tupaia belangeri ENSTBEG00000004887 I
CREB3L2 Taeniopygia guttata ENSTGUG00000011582 I
creb3l3l Tetraodon nigroviridis ENSTNIG00000016667 I
CREB3L4 Takifugu rubripes ENSTRUG00000011094 I
CREB3L2 Tursiops truncatus ENSTTRG00000004842 I
ENSXMAG00000001292 Xiphophorus maculatus ENSXMAG00000001292 I
ENSXMAG00000004377 Xiphophorus maculatus ENSXMAG00000004377 I
Gfo_R015139 Geospiza fortis Gfo_R015139 I
ISCW001814 Ixodes scapularis ISCW001814 I
Myotis_brandtii_CREB3L2_10008636 Myotis brandtii Myotis_brandtii_CREB3L2_10008636 I
Myotis_brandtii_CREB3L3_10016301 Myotis brandtii Myotis_brandtii_CREB3L3_10016301 I
Myotis_brandtii_CREB3L4_10031903 Myotis brandtii Myotis_brandtii_CREB3L4_10031903 I
NEMVEDRAFT_v1g243817 Nematostella vectensis NEMVEDRAFT_v1g243817 I
NEMVEDRAFT_v1g28519 Nematostella vectensis NEMVEDRAFT_v1g28519 I
Ogr06733 Ophisaurus gracilis Ogr06733 I
Pvit_02332 Pogona vitticeps Pvit_02332 I
Pvit_09828 Pogona vitticeps Pvit_09828 I
Pvit_14149 Pogona vitticeps Pvit_14149 I
Tal_R001519 Tyto alba Tal_R001519 I
creb3l4 Xenopus tropicalis XB-GENE-5761389 I
creb3l2.L Xenopus laevis XB-GENE-996214 I