CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_6DS_1FC471B7F
(
Triticum aestivum
)
Whirly
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08536 (Whirly)
IPR013742
Traes_6DS_1FC471B7F
T350578_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_6DS_1FC471B7F.1
Whirly
68
203
VFKGKAALSISPILPLFTKVESGGSRVDRNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGPAESCEFFHDPSMKSSHEGQVKKSLSITPLGSDNGYFVNITVLNNVQKTNERLSVPVTKAEFAVMRTA
Links
Other
Whirly
family TFs
Other
Triticum aestivum
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29706.m001307
Ricinus communis
29706.m001307
N
29912.m005288
Ricinus communis
29912.m005288
N
AALB004535
Anopheles albimanus
AALB004535
I
ACEP21720
Atta cephalotes
ACEP21720
I
ACUA028400
Anopheles culicifacies
ACUA028400
I
AGAP007376
Anopheles gambiae
AGAP007376
I
NFYA5
Arabidopsis lyrata
Al_scaffold_0001_4860
N
Al_scaffold_0003_1456
Arabidopsis lyrata
Al_scaffold_0003_1456
N
AMAM001825
Anopheles maculatus
AMAM001825
I
AMTR_s00004p00174960
Amborella trichopoda
AMTR_s00004p00174960
N
AMTR_s00024p00195160
Amborella trichopoda
AMTR_s00024p00195160
I
AMTR_s00048p00192930
Amborella trichopoda
AMTR_s00048p00192930
I
Aquca_009_00676
Aquilegia coerulea
Aquca_009_00676
N
Aquca_020_00519
Aquilegia coerulea
Aquca_020_00519
N
Aquca_076_00118
Aquilegia coerulea
Aquca_076_00118
N
NFYA8
Arabidopsis thaliana
AT1G17590
N
NFYA7
Arabidopsis thaliana
AT1G30500
N
NFYA5
Arabidopsis thaliana
AT1G54160
N
HAP2C
Arabidopsis thaliana
AT1G72830
N
NFYA6
Arabidopsis thaliana
AT3G14020
N
NFYA9
Arabidopsis thaliana
AT3G20910
N
BGIOSGA005501
Oryza indica
BGIOSGA005501
N
BGIOSGA010142
Oryza indica
BGIOSGA010142
N
BGIOSGA011352
Oryza indica
BGIOSGA011352
I
BGIOSGA012852
Oryza indica
BGIOSGA012852
N
BGIOSGA023919
Oryza indica
BGIOSGA023919
I
BGIOSGA035844
Oryza indica
BGIOSGA035844
N
Bo1g134650
Brassica oleracea
Bo1g134650
N
Bo2g079060
Brassica oleracea
Bo2g079060
N
Bo3g184530
Brassica oleracea
Bo3g184530
N
Bo5g063060
Brassica oleracea
Bo5g063060
N
Bo5g105110
Brassica oleracea
Bo5g105110
I
Bo6g050970
Brassica oleracea
Bo6g050970
N
Bo6g090310
Brassica oleracea
Bo6g090310
N
Bo6g116210
Brassica oleracea
Bo6g116210
N
Bo6g116240
Brassica oleracea
Bo6g116240
N
Bo6g116250
Brassica oleracea
Bo6g116250
N
Bostr.10273s0069
Boechera stricta
Bostr.10273s0069
N
Bostr.15697s0348
Boechera stricta
Bostr.15697s0348
N
Bostr.19424s0556
Boechera stricta
Bostr.19424s0556
N
Bostr.28625s0302
Boechera stricta
Bostr.28625s0302
N
Bostr.7128s0065
Boechera stricta
Bostr.7128s0065
N
Bra003867
Brassica rapa
Bra003867
N
Bra008052
Brassica rapa
Bra008052
N
Bra014368
Brassica rapa
Bra014368
N
Bra016031
Brassica rapa
Bra016031
N
Bra021527
Brassica rapa
Bra021527
N
Bra030899
Brassica rapa
Bra030899
N
Bra030996
Brassica rapa
Bra030996
N
Bra031242
Brassica rapa
Bra031242
I
Bra032395
Brassica rapa
Bra032395
N
Bra037968
Brassica rapa
Bra037968
N
BRADI1G13680
Brachypodium distachyon
BRADI1G13680
N
BRADI1G72960
Brachypodium distachyon
BRADI1G72960
I
BRADI3G57320
Brachypodium distachyon
BRADI3G57320
N
BRADI4G01380
Brachypodium distachyon
BRADI4G01380
N
BRADI4G01820
Brachypodium distachyon
BRADI4G01820
N
Cagra.0736s0041
Capsella grandiflora
Cagra.0736s0041
N
Cagra.1013s0019
Capsella grandiflora
Cagra.1013s0019
N
Cagra.10399s0005
Capsella grandiflora
Cagra.10399s0005
N
Cagra.1508s0155
Capsella grandiflora
Cagra.1508s0155
N
Cagra.20869s0002
Capsella grandiflora
Cagra.20869s0002
N
CAOG_07995
Capsaspora owczarzaki
CAOG_07995
I
Carubv10009883m.g
Capsella rubella
Carubv10009883m.g
N
Carubv10010359m.g
Capsella rubella
Carubv10010359m.g
N
Carubv10014289m.g
Capsella rubella
Carubv10014289m.g
N
Carubv10014390m.g
Capsella rubella
Carubv10014390m.g
N
Carubv10020596m.g
Capsella rubella
Carubv10020596m.g
N
cassava2701.m1
Manihot esculenta
cassava2701.m1
N
cassava38312.valid.m1
Manihot esculenta
cassava38312.valid.m1
N
Ca_02713
Cicer arietinum
Ca_02713
N
Ca_10039
Cicer arietinum
Ca_10039
N
Ca_11593
Cicer arietinum
Ca_11593
N
Cflo_01621--XP_001121566.1_APIME
Camponotus floridanus
Cflo_01621--XP_001121566.1_APIME
I
CGI_10012001
Crassostrea gigas
CGI_10012001
I
chr3.CM0724.30.nd
Lotus japonicus
chr3.CM0724.30.nd
I
Ciclev10026020m.g
Citrus clementina
Ciclev10026020m.g
I
Cla008690
Citrullus lanatus
Cla008690
N
Cla017115
Citrullus lanatus
Cla017115
N
CPIJ010764
Culex quinquefasciatus
CPIJ010764
I
CPIJ017497
Culex quinquefasciatus
CPIJ017497
I
CpipJ_CPIJ010764
Culex pipiens
CpipJ_CPIJ010764
I
CpipJ_CPIJ017497
Culex pipiens
CpipJ_CPIJ017497
I
Cucsa.124180
Cucumis sativus
Cucsa.124180
N
Eucgr.C00842
Eucalyptus grandis
Eucgr.C00842
N
Eucgr.F03169
Eucalyptus grandis
Eucgr.F03169
I
Eucgr.G03377
Eucalyptus grandis
Eucgr.G03377
N
evm.TU.supercontig_25.96
Carica papaya
evm.TU.supercontig_25.96
N
F775_07647
Aegilops tauschii
F775_07647
N
F775_07666
Aegilops tauschii
F775_07666
N
F775_25120
Aegilops tauschii
F775_25120
N
F775_30001
Aegilops tauschii
F775_30001
I
HAP2C
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2001597
N
fgenesh1_pg.C_scaffold_286000001
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_286000001
N
NF-YA8
Arabidopsis lyrata
fgenesh2_kg.1__1922__AT1G17590.3
N
NF-YA7
Arabidopsis lyrata
fgenesh2_kg.1__3232__AT1G30500.2
N
fgeneshMC_pg.10_#_374
Mucor circinelloides
fgeneshMC_pg.10_#_374
I
GB50732
Apis mellifera
GB50732
I
gene07522-v1.0-hybrid
Fragaria vesca
gene07522-v1.0-hybrid
N
gene12709-v1.0-hybrid
Fragaria vesca
gene12709-v1.0-hybrid
N
GLOINDRAFT_349601
Rhizophagus irregularis
GLOINDRAFT_349601
I
GLYMA07G04050
Glycine max
GLYMA07G04050
I
GLYMA09G07960
Glycine max
GLYMA09G07960
I
GLYMA13G16770
Glycine max
GLYMA13G16770
N
GLYMA15G03175
Glycine max
GLYMA15G03175
N
GLYMA15G18970
Glycine max
GLYMA15G18970
I
GLYMA16G00711
Glycine max
GLYMA16G00711
I
GLYMA17G05920
Glycine max
GLYMA17G05920
I
Gorai.001G014200
Gossypium raimondii
Gorai.001G014200
N
Gorai.009G115000
Gossypium raimondii
Gorai.009G115000
N
Gorai.009G143800
Gossypium raimondii
Gorai.009G143800
N
Gorai.010G086300
Gossypium raimondii
Gorai.010G086300
N
Gorai.011G057600
Gossypium raimondii
Gorai.011G057600
N
Gorai.012G010900
Gossypium raimondii
Gorai.012G010900
N
Gorai.013G226200
Gossypium raimondii
Gorai.013G226200
I
GRMZM2G000686
Zea mays
GRMZM2G000686
I
GRMZM2G037630
Zea mays
GRMZM2G037630
N
GRMZM2G038303
Zea mays
GRMZM2G038303
I
GRMZM2G040349
Zea mays
GRMZM2G040349
I
GRMZM2G104396
Zea mays
GRMZM2G104396
N
GRMZM2G126957
Zea mays
GRMZM2G126957
N
GRMZM2G361842
Zea mays
GRMZM2G361842
N
GRMZM5G857944
Zea mays
GRMZM5G857944
N
GSMUA_Achr2G21730_001
Musa acuminata
GSMUA_Achr2G21730_001
N
GSMUA_Achr4G28390_001
Musa acuminata
GSMUA_Achr4G28390_001
N
GSMUA_Achr7G07860_001
Musa acuminata
GSMUA_Achr7G07860_001
N
GSMUA_Achr8G16700_001
Musa acuminata
GSMUA_Achr8G16700_001
N
GSMUA_Achr8G30700_001
Musa acuminata
GSMUA_Achr8G30700_001
I
GSMUA_AchrUn_randomG15140_001
Musa acuminata
GSMUA_AchrUn_randomG15140_001
I
Hsal_09569--XP_001121566.1_APIME
Harpegnathos saltator
Hsal_09569--XP_001121566.1_APIME
I
LDEC000161
Leptinotarsa decemlineata
LDEC000161
I
LjSGA_058509.1
Lotus japonicus
LjSGA_058509.1
N
LjT30L14.130.nd
Lotus japonicus
LjT30L14.130.nd
N
LPERR02G28390
Leersia perrieri
LPERR02G28390
I
LPERR03G04900
Leersia perrieri
LPERR03G04900
I
LPERR03G18110
Leersia perrieri
LPERR03G18110
I
LPERR03G22840
Leersia perrieri
LPERR03G22840
N
LPERR07G18840
Leersia perrieri
LPERR07G18840
I
LPERR08G05240
Leersia perrieri
LPERR08G05240
N
LPERR12G15680
Leersia perrieri
LPERR12G15680
N
Lus10009944.g
Linum usitatissimum
Lus10009944.g
I
Lus10023358.g
Linum usitatissimum
Lus10023358.g
N
Lus10030137.g
Linum usitatissimum
Lus10030137.g
I
Lus10038448.g
Linum usitatissimum
Lus10038448.g
N
MDP0000223651
Malus domestica
MDP0000223651
N
MDP0000434309
Malus domestica
MDP0000434309
N
MDP0000506954
Malus domestica
MDP0000506954
N
MDP0000827821
Malus domestica
MDP0000827821
N
mg014677m
Mimulus guttatus
mg014677m
N
mgf004929m
Mimulus guttatus
mgf004929m
N
mgf012950m
Mimulus guttatus
mgf012950m
I
mgf023644m
Mimulus guttatus
mgf023644m
N
MLOC_36554
Hordeum vulgare
MLOC_36554
N
MLOC_52315
Hordeum vulgare
MLOC_52315
N
MLOC_62730
Hordeum vulgare
MLOC_62730
I
MLOC_67781
Hordeum vulgare
MLOC_67781
I
MTR_2g041090
Medicago truncatula
MTR_2g041090
N
MTR_2g099490
Medicago truncatula
MTR_2g099490
N
MTR_8g019540
Medicago truncatula
MTR_8g019540
I
NV16776
Nasonia vitripennis
NV16776
I
OB02G41320
Oryza brachyantha
OB02G41320
I
OB03G15670
Oryza brachyantha
OB03G15670
I
OB03G30290
Oryza brachyantha
OB03G30290
I
OB03G35340
Oryza brachyantha
OB03G35340
N
OB03G37700
Oryza brachyantha
OB03G37700
I
OB07G27370
Oryza brachyantha
OB07G27370
I
OB12G25340
Oryza brachyantha
OB12G25340
N
OBART02G34510
Oryza barthii
OBART02G34510
I
OBART03G05590
Oryza barthii
OBART03G05590
I
OBART03G21180
Oryza barthii
OBART03G21180
I
OBART07G21740
Oryza barthii
OBART07G21740
I
OBART12G18640
Oryza barthii
OBART12G18640
N
Ocbimv22027261m.g
Octopus bimaculoides
Ocbimv22027261m.g
I
OGLUM03G05530
Oryza glumaepatula
OGLUM03G05530
I
OGLUM03G21930
Oryza glumaepatula
OGLUM03G21930
I
OGLUM03G28230
Oryza glumaepatula
OGLUM03G28230
N
OGLUM07G21630
Oryza glumaepatula
OGLUM07G21630
I
OGLUM12G20290
Oryza glumaepatula
OGLUM12G20290
N
OLONG_003469
Oryza longistaminata
OLONG_003469
N
OLONG_006035
Oryza longistaminata
OLONG_006035
I
OLONG_006679
Oryza longistaminata
OLONG_006679
I
OLONG_008329
Oryza longistaminata
OLONG_008329
N
OLONG_009142
Oryza longistaminata
OLONG_009142
I
OMERI02G32760
Oryza meridionalis
OMERI02G32760
I
OMERI03G05270
Oryza meridionalis
OMERI03G05270
I
OMERI03G19370
Oryza meridionalis
OMERI03G19370
I
OMERI03G24480
Oryza meridionalis
OMERI03G24480
N
OMERI07G18140
Oryza meridionalis
OMERI07G18140
I
OMERI12G14030
Oryza meridionalis
OMERI12G14030
N
ONIVA02G36550
Oryza nivara
ONIVA02G36550
I
ONIVA03G05390
Oryza nivara
ONIVA03G05390
I
ONIVA03G10270
Oryza nivara
ONIVA03G10270
I
ONIVA03G28530
Oryza nivara
ONIVA03G28530
N
ONIVA06G16650
Oryza nivara
ONIVA06G16650
I
ONIVA12G17590
Oryza nivara
ONIVA12G17590
N
OPUNC02G31840
Oryza punctata
OPUNC02G31840
I
OPUNC03G05290
Oryza punctata
OPUNC03G05290
I
OPUNC03G19990
Oryza punctata
OPUNC03G19990
I
OPUNC03G25190
Oryza punctata
OPUNC03G25190
N
OPUNC07G20270
Oryza punctata
OPUNC07G20270
I
OPUNC12G16850
Oryza punctata
OPUNC12G16850
N
orange1.1g019782m.g
Citrus sinensis
orange1.1g019782m.g
I
ORGLA02G0298500
Oryza glaberrima
ORGLA02G0298500
I
ORGLA03G0053200
Oryza glaberrima
ORGLA03G0053200
I
ORGLA03G0197400
Oryza glaberrima
ORGLA03G0197400
I
ORGLA07G0166900
Oryza glaberrima
ORGLA07G0166900
I
ORGLA12G0159000
Oryza glaberrima
ORGLA12G0159000
N
ORUFI03G05370
Oryza rufipogon
ORUFI03G05370
I
ORUFI03G21850
Oryza rufipogon
ORUFI03G21850
I
ORUFI03G28690
Oryza rufipogon
ORUFI03G28690
N
ORUFI07G22690
Oryza rufipogon
ORUFI07G22690
I
ORUFI12G20840
Oryza rufipogon
ORUFI12G20840
N
OS02G0776400
Oryza sativa
OS02G0776400
I
OS03G0174900
Oryza sativa
OS03G0174900
I
OS03G0411100
Oryza sativa
OS03G0411100
N
OS03G0647600
Oryza sativa
OS03G0647600
N
OS07G0608200
Oryza sativa
OS07G0608200
I
OS12G0613000
Oryza sativa
OS12G0613000
N
Pavir.Aa00318
Panicum virgatum
Pavir.Aa00318
I
Pavir.Ba00442
Panicum virgatum
Pavir.Ba00442
I
Pavir.Ca02834
Panicum virgatum
Pavir.Ca02834
N
Pavir.Ia04345
Panicum virgatum
Pavir.Ia04345
I
Pavir.Ib00471
Panicum virgatum
Pavir.Ib00471
I
Pavir.Ib01915
Panicum virgatum
Pavir.Ib01915
I
Pavir.J00945
Panicum virgatum
Pavir.J00945
I
Pavir.J05826
Panicum virgatum
Pavir.J05826
I
Pavir.J06031
Panicum virgatum
Pavir.J06031
N
PDK_20s1300541g001
Phoenix dactylifera
PDK_20s1300541g001
I
PDK_20s1462571g003
Phoenix dactylifera
PDK_20s1462571g003
N
PGSC0003DMG400000272
Solanum tuberosum
PGSC0003DMG400000272
N
PGSC0003DMG400002484
Solanum tuberosum
PGSC0003DMG400002484
N
PGSC0003DMG400011806
Solanum tuberosum
PGSC0003DMG400011806
N
PGSC0003DMG400021747
Solanum tuberosum
PGSC0003DMG400021747
I
PHUM011400
Pediculus humanus
PHUM011400
I
PK17701.1
Cannabis sativa
PK17701.1
N
PK20005.1
Cannabis sativa
PK20005.1
N
Pm013295
Prunus mume
Pm013295
N
Pm027028
Prunus mume
Pm027028
N
POPTR_0006s14740
Populus trichocarpa
POPTR_0006s14740
N
POPTR_0011s10080
Populus trichocarpa
POPTR_0011s10080
N
POPTR_0018s07220
Populus trichocarpa
POPTR_0018s07220
N
PRUPE_ppa016008mg
Prunus persica
PRUPE_ppa016008mg
N
PRUPE_ppa020977mg
Prunus persica
PRUPE_ppa020977mg
N
Sakowv30001860m.g
Saccoglossus kowalevskii
Sakowv30001860m.g
I
SapurV1A.0087s0010
Salix purpurea
SapurV1A.0087s0010
N
SapurV1A.0133s0410
Salix purpurea
SapurV1A.0133s0410
I
SapurV1A.0563s0020
Salix purpurea
SapurV1A.0563s0020
N
SapurV1A.1588s0020
Salix purpurea
SapurV1A.1588s0020
N
Sb01g032710
Sorghum bicolor
Sb01g032710
I
Sb01g045500
Sorghum bicolor
Sb01g045500
I
Sb02g038960
Sorghum bicolor
Sb02g038960
I
Sb04g034760
Sorghum bicolor
Sb04g034760
I
Sb08g021370
Sorghum bicolor
Sb08g021370
N
NF-YA9
Arabidopsis lyrata
scaffold_302497.1
N
Si019645m.g
Setaria italica
Si019645m.g
N
Si023231m.g
Setaria italica
Si023231m.g
N
Si030663m.g
Setaria italica
Si030663m.g
I
Si036728m.g
Setaria italica
Si036728m.g
I
Si037269m.g
Setaria italica
Si037269m.g
I
SINV17788
Solenopsis invicta
SINV17788
I
SMU15029949
Schmidtea mediterranea
SMU15029949
I
Solyc02g069860.2
Solanum lycopersicum
Solyc02g069860.2
N
Solyc03g121940.2
Solanum lycopersicum
Solyc03g121940.2
N
Solyc08g062210.2
Solanum lycopersicum
Solyc08g062210.2
I
Solyc12g009050.1
Solanum lycopersicum
Solyc12g009050.1
N
SPPG_06102
Spizellomyces punctatus
SPPG_06102
I
TC007453
Tribolium castaneum
TC007453
I
TCM_029103
Theobroma cacao
TCM_029103
N
TCM_037576
Theobroma cacao
TCM_037576
N
Thhalv10009032m.g
Eutrema salsugineum
Thhalv10009032m.g
N
Thhalv10011685m.g
Eutrema salsugineum
Thhalv10011685m.g
N
Thhalv10018869m.g
Eutrema salsugineum
Thhalv10018869m.g
N
Thhalv10021240m.g
Eutrema salsugineum
Thhalv10021240m.g
I
Thhalv10021250m.g
Eutrema salsugineum
Thhalv10021250m.g
N
Traes_2AS_7C177F9DB
Triticum aestivum
Traes_2AS_7C177F9DB
I
Traes_2BS_A95B28510
Triticum aestivum
Traes_2BS_A95B28510
I
Traes_2DS_69FBC78BC
Triticum aestivum
Traes_2DS_69FBC78BC
I
Traes_4AS_2603E68AF
Triticum aestivum
Traes_4AS_2603E68AF
I
Traes_4BL_7DA93696E
Triticum aestivum
Traes_4BL_7DA93696E
I
Traes_4DL_8156B39DF
Triticum aestivum
Traes_4DL_8156B39DF
I
Traes_5AL_047ABC9FC
Triticum aestivum
Traes_5AL_047ABC9FC
N
Traes_5AS_178725FAF
Triticum aestivum
Traes_5AS_178725FAF
N
Traes_5BL_B5F4BA2FD
Triticum aestivum
Traes_5BL_B5F4BA2FD
N
Traes_5BS_49C7C1976
Triticum aestivum
Traes_5BS_49C7C1976
N
Traes_5DL_7F3ABFDD6
Triticum aestivum
Traes_5DL_7F3ABFDD6
N
Traes_5DS_5B1AB0AD3
Triticum aestivum
Traes_5DS_5B1AB0AD3
N
Traes_6AL_C0E74F959
Triticum aestivum
Traes_6AL_C0E74F959
N
Traes_6BL_953171851
Triticum aestivum
Traes_6BL_953171851
N
Traes_6DL_29F162FB2
Triticum aestivum
Traes_6DL_29F162FB2
N
Traes_6DL_FD903DBD8
Triticum aestivum
Traes_6DL_FD903DBD8
I
TRIUR3_08409
Triticum urartu
TRIUR3_08409
I
TRIUR3_22025
Triticum urartu
TRIUR3_22025
I
TRIUR3_27732
Triticum urartu
TRIUR3_27732
N
TRIUR3_28928
Triticum urartu
TRIUR3_28928
N
TRIUR3_30486
Triticum urartu
TRIUR3_30486
N
VIT_10s0003g04650
Vitis vinifera
VIT_10s0003g04650
N
VIT_11s0016g01480
Vitis vinifera
VIT_11s0016g01480
N