orange1.1g026312m.g (Citrus sinensis)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 orange1.1g026312m.g T350642_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g026312m Whirly 65 198
orange1.1g026468m Whirly 65 198
orange1.1g028165m Whirly 65 198
orange1.1g028964m Whirly 65 198
orange1.1g030060m Whirly 65 179
orange1.1g030376m Whirly 65 178

Links

Other Whirly family TFs
Other Citrus sinensis TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA007535 Oryza indica BGIOSGA007535 N 0.000
BRADI3G03747 Brachypodium distachyon BRADI3G03747 N 0.000
GRMZM2G033138 Zea mays GRMZM2G033138 N 0.000
GSMUA_Achr8G23890_001 Musa acuminata GSMUA_Achr8G23890_001 N 0.000
LPERR02G03280 Leersia perrieri LPERR02G03280 N 0.000
OB02G13160 Oryza brachyantha OB02G13160 N 0.000
ORGLA02G0034400 Oryza glaberrima ORGLA02G0034400 N 0.000
ORUFI02G03770 Oryza rufipogon ORUFI02G03770 N 0.000
OS02G0147800 Oryza sativa OS02G0147800 N 0.000
Pavir.Ab00383 Panicum virgatum Pavir.Ab00383 N 0.000
Pavir.J02165 Panicum virgatum Pavir.J02165 N 0.000
Sb04g003450 Sorghum bicolor Sb04g003450 N 0.000
Si019956m.g Setaria italica Si019956m.g N 0.000