CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g014690
(
Brassica oleracea
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
Bo4g014690
T350729_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42040
M01088_2.00
Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN
PBM
Sullivan et al.(2014)
pTH7503
0.930
0.930
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g014690.1
WRC
156
198
EEGSRCSRVNGRGWRCFQQTLYGYSLCEHHLGKGRVRSMNKSA
Links
Other
WRC
family TFs
Other
Brassica oleracea
TFs
88 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_05723
Capronia epimyces
A1O3_05723
I
0.000
A1O5_08857
Cladophialophora psammophila
A1O5_08857
I
0.000
A1O7_06270
Cladophialophora yegresii
A1O7_06270
I
0.000
A1O9_10773
Exophiala aquamarina
A1O9_10773
I
0.000
ARB_00440
Arthroderma benhamiae
ARB_00440
I
0.000
ANIA_01298
Aspergillus nidulans
CADANIAG00001319
D
0.000
CIMG_10254
Coccidioides immitis
CIMG_10254
I
0.000
CPC735_013440
Coccidioides posadasii
CPC735_013440
I
0.000
DOTSEDRAFT_69021
Dothistroma septosporum
DOTSEDRAFT_69021
I
0.000
fgenesh1_pm.C_chr_1000941
Mycosphaerella graminicola
fgenesh1_pm.C_chr_1000941
I
0.000
fgenesh1_pm.C_scaffold_1000119
Mycosphaerella fijiensis
fgenesh1_pm.C_scaffold_1000119
I
0.000
G647_06262
Cladophialophora carrionii
G647_06262
I
0.000
GSTUM_00003292001
Tuber melanosporum
GSTUM_00003292001
I
0.000
H102_01702
Trichophyton rubrum
H102_01702
I
0.000
H105_01718
Trichophyton soudanense
H105_01718
I
0.000
HMPREF1120_04164
Exophiala dermatitidis
HMPREF1120_04164
I
0.000
MCYG_06262
Microsporum canis
MCYG_06262
I
0.000
MGYG_06696
Microsporum gypseum
MGYG_06696
I
0.000
MPH_03547
Macrophomina phaseolina
MPH_03547
I
0.000
MYCFIDRAFT_148203
Pseudocercospora fijiensis
MYCFIDRAFT_148203
I
0.000
Mycgr3G84231
Zymoseptoria tritici
Mycgr3G84231
I
0.000
OCS_06442
Ophiocordyceps sinensis
OCS_06442
I
0.000
PAAG_02798
Paracoccidioides sp lutzii
PAAG_02798
I
0.000
PABG_03267
Paracoccidioides brasiliensis
PABG_03267
I
0.000
Pc16g06560
Penicillium chrysogenum
Pc16g06560
I
0.000
PCH_Pc16g06560
Penicillium rubens
PCH_Pc16g06560
I
0.000
PDIP_40460
Penicillium digitatum
PDIP_40460
I
0.000
PEX1_052970
Penicillium expansum
PEX1_052970
I
0.000
PITC_023420
Penicillium italicum
PITC_023420
I
0.000
PV04_06676
Capronia semiimmersa
PV04_06676
I
0.000
PV05_08012
Exophiala xenobiotica
PV05_08012
I
0.000
PV07_03563
Cladophialophora immunda
PV07_03563
I
0.000
PV08_08114
Exophiala spinifera
PV08_08114
I
0.000
PV09_02314
Verruconis gallopava
PV09_02314
N
0.000
PV11_07531
Exophiala sideris
PV11_07531
I
0.000
PVAR5_5311
Byssochlamys spectabilis
PVAR5_5311
I
0.000
TRV_02680
Trichophyton verrucosum
TRV_02680
I
0.000
U727_0043047031
Penicillium solitum
U727_0043047031
I
0.000
UCREL1_1818
Eutypa lata
UCREL1_1818
I
0.000
UCRNP2_6160
Neofusicoccum parvum
UCRNP2_6160
I
0.000
UREG_03477
Uncinocarpus reesii
UREG_03477
I
0.000
Z517_01133
Fonsecaea pedrosoi
Z517_01133
I
0.000
Z518_05851
Rhinocladiella mackenziei
Z518_05851
I
0.000
Z519_03796
Cladophialophora bantiana
Z519_03796
I
0.000