CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA17G05800
(
Glycine max
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
GLYMA17G05800
T350850_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtGRF6
M02545_2.00
Arabidopsis thaliana
NNNNYDNN
NNHRNNNN
PBM
Weirauch et al.(2014)
pTH7356
0.860
0.860
AtGRF6
M07369_2.00
Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN
Dap-seq
OMalley et al.(2016)
AtGRF6_col_a
0.860
0.860
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA17G05800.1
WRC
46
88
PEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE
GLYMA17G05800.2
WRC
77
119
PEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE
Links
Other
WRC
family TFs
Other
Glycine max
TFs
576 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
E5Q_00300
Mixia osmundae
E5Q_00300
N
0.000
e_gw1.10.50.1
Sporobolomyces roseus
e_gw1.10.50.1
N
0.000
M437DRAFT_67323
Aureobasidium melanogenum
M437DRAFT_67323
N
0.000
MVLG_05769
Microbotryum violaceum
MVLG_05769
N
0.000
MVLG_06491
Microbotryum violaceum
MVLG_06491
N
0.000
RHTO_01872
Rhodosporidium toruloides
RHTO_01872
N
0.000