OGLUM06G01060 (Oryza glumaepatula)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 OGLUM06G01060 T351025_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtGRF6
M02545_2.00 		Arabidopsis thaliana
NNNNYDNN
NNHRNNNN		 PBM
Weirauch et al.(2014)
pTH7356 		0.791 0.791
AtGRF6
M07369_2.00 		Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN		 Dap-seq
OMalley et al.(2016)
AtGRF6_col_a 		0.791 0.791
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM06G01060.1 WRC 98 140
OGLUM06G01060.2 WRC 98 140
OGLUM06G01060.3 WRC 98 140
OGLUM06G01060.4 WRC 98 140
OGLUM06G01060.5 WRC 98 140

Links

Other WRC family TFs
Other Oryza glumaepatula TFs

594 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30170.m013673 Ricinus communis 30170.m013673 N 0.791
30190.m011066 Ricinus communis 30190.m011066 I 0.884
AMTR_s00048p00216350 Amborella trichopoda AMTR_s00048p00216350 I 0.907
AMTR_s00065p00092420 Amborella trichopoda AMTR_s00065p00092420 N 0.814
Aquca_006_00049 Aquilegia coerulea Aquca_006_00049 N 0.814
Aquca_037_00140 Aquilegia coerulea Aquca_037_00140 N 0.814
GRF3 Arabidopsis thaliana AT2G36400 N 0.814
BGIOSGA013499 Oryza indica BGIOSGA013499 N 0.791
BGIOSGA025662 Oryza indica BGIOSGA025662 N 0.000
Bo4g186220 Brassica oleracea Bo4g186220 N 0.814
Bostr.23794s0452 Boechera stricta Bostr.23794s0452 N 0.814
BRADI1G09900 Brachypodium distachyon BRADI1G09900 N 0.791
BRADI1G28400 Brachypodium distachyon BRADI1G28400 N 0.000
BRADI2G14320 Brachypodium distachyon BRADI2G14320 N 0.000
Cagra.0228s0030 Capsella grandiflora Cagra.0228s0030 N 0.814
Carubv10025172m.g Capsella rubella Carubv10025172m.g N 0.814
cassava22415.valid.m1 Manihot esculenta cassava22415.valid.m1 N 0.814
cassava30116.valid.m1 Manihot esculenta cassava30116.valid.m1 I 0.884
Ca_00772 Cicer arietinum Ca_00772 N 0.814
Ciclev10011856m.g Citrus clementina Ciclev10011856m.g N 0.791
Ciclev10022033m.g Citrus clementina Ciclev10022033m.g I 0.860
Cla017990 Citrullus lanatus Cla017990 N 0.814
Cla022992 Citrullus lanatus Cla022992 N 0.814
Cucsa.378420 Cucumis sativus Cucsa.378420 N 0.814
Cucsa.395430 Cucumis sativus Cucsa.395430 N 0.814
Eucgr.F00097 Eucalyptus grandis Eucgr.F00097 N 0.814
evm.TU.supercontig_5.63 Carica papaya evm.TU.supercontig_5.63 N 0.814
F775_29935 Aegilops tauschii F775_29935 N 0.000
AtGRF3 Arabidopsis lyrata fgenesh2_kg.4__1676__AT2G36400.1 N 0.814
GLYMA03G35010 Glycine max GLYMA03G35010 N 0.814
GLYMA04G40880 Glycine max GLYMA04G40880 N 0.814
GLYMA06G13960 Glycine max GLYMA06G13960 N 0.814
GLYMA19G37740 Glycine max GLYMA19G37740 N 0.814
Gorai.004G204600 Gossypium raimondii Gorai.004G204600 I 0.860
Gorai.005G098700 Gossypium raimondii Gorai.005G098700 N 0.814
Gorai.008G241800 Gossypium raimondii Gorai.008G241800 I 0.884
Gorai.009G222200 Gossypium raimondii Gorai.009G222200 N 0.814
Gorai.009G277500 Gossypium raimondii Gorai.009G277500 N 0.791
Gorai.010G027700 Gossypium raimondii Gorai.010G027700 N 0.814
GRMZM2G004619 Zea mays GRMZM2G004619 N 0.000
GRMZM2G067743 Zea mays GRMZM2G067743 I 0.837
GRMZM2G096709 Zea mays GRMZM2G096709 N 0.000
GSMUA_Achr3G15140_001 Musa acuminata GSMUA_Achr3G15140_001 N 0.791
GSMUA_Achr7G27480_001 Musa acuminata GSMUA_Achr7G27480_001 N 0.791
GSMUA_Achr8G04970_001 Musa acuminata GSMUA_Achr8G04970_001 N 0.791
GSMUA_Achr8G12060_001 Musa acuminata GSMUA_Achr8G12060_001 N 0.814
LPERR03G27480 Leersia perrieri LPERR03G27480 N 0.791
LPERR07G11440 Leersia perrieri LPERR07G11440 N 0.000
mgf001554m Mimulus guttatus mgf001554m N 0.814
MLOC_70581 Hordeum vulgare MLOC_70581 N 0.000
MTR_7g104050 Medicago truncatula MTR_7g104050 N 0.791
OB07G19720 Oryza brachyantha OB07G19720 N 0.000
OBART03G32870 Oryza barthii OBART03G32870 N 0.791
OBART07G13680 Oryza barthii OBART07G13680 N 0.000
OGLUM03G32510 Oryza glumaepatula OGLUM03G32510 N 0.791
OGLUM07G12780 Oryza glumaepatula OGLUM07G12780 N 0.000
OLONG_025015 Oryza longistaminata OLONG_025015 N 0.000
OMERI03G29560 Oryza meridionalis OMERI03G29560 N 0.791
OMERI07G10850 Oryza meridionalis OMERI07G10850 N 0.000
OMERI08G17030 Oryza meridionalis OMERI08G17030 N 0.000
ONIVA03G34380 Oryza nivara ONIVA03G34380 N 0.791
ONIVA07G11690 Oryza nivara ONIVA07G11690 N 0.000
OPUNC03G30000 Oryza punctata OPUNC03G30000 N 0.791
OPUNC07G12320 Oryza punctata OPUNC07G12320 N 0.000
ORGLA03G0298100 Oryza glaberrima ORGLA03G0298100 N 0.791
ORGLA07G0115500 Oryza glaberrima ORGLA07G0115500 N 0.000
ORUFI03G34250 Oryza rufipogon ORUFI03G34250 N 0.791
ORUFI07G13880 Oryza rufipogon ORUFI07G13880 N 0.000
OS03G0729500 Oryza sativa OS03G0729500 N 0.791
Pavir.Ba01449 Panicum virgatum Pavir.Ba01449 N 0.000
Pavir.Bb02610 Panicum virgatum Pavir.Bb02610 N 0.000
PDK_20s1348362g001 Phoenix dactylifera PDK_20s1348362g001 N 0.791
PGSC0003DMG400004942 Solanum tuberosum PGSC0003DMG400004942 N 0.814
PK18842.1 Cannabis sativa PK18842.1 N 0.814
Pm005437 Prunus mume Pm005437 N 0.814
POPTR_0002s11590 Populus trichocarpa POPTR_0002s11590 N 0.814
POPTR_0014s01320 Populus trichocarpa POPTR_0014s01320 N 0.814
PRUPE_ppa019623mg Prunus persica PRUPE_ppa019623mg N 0.814
SapurV1A.0004s0240 Salix purpurea SapurV1A.0004s0240 N 0.791
SapurV1A.0532s0070 Salix purpurea SapurV1A.0532s0070 N 0.791
SapurV1A.3102s0020 Salix purpurea SapurV1A.3102s0020 N 0.791
Sb02g032860 Sorghum bicolor Sb02g032860 N 0.000
Si030809m.g Setaria italica Si030809m.g N 0.000
Solyc04g077510.2 Solanum lycopersicum Solyc04g077510.2 N 0.814
TCM_016120 Theobroma cacao TCM_016120 I 0.884
TCM_022490 Theobroma cacao TCM_022490 N 0.814
TCM_034655 Theobroma cacao TCM_034655 N 0.814
Thhalv10016778m.g Eutrema salsugineum Thhalv10016778m.g N 0.814
Traes_2AS_CA4D79100 Triticum aestivum Traes_2AS_CA4D79100 N 0.000
Traes_2BS_E3CBE0B73 Triticum aestivum Traes_2BS_E3CBE0B73 N 0.000
Traes_2DL_243DA9D84 Triticum aestivum Traes_2DL_243DA9D84 N 0.000
TRIUR3_26160 Triticum urartu TRIUR3_26160 N 0.000
AtGRF7 Vitis vinifera VIT_16s0098g01080 N 0.791
VIT_18s0001g08650 Vitis vinifera VIT_18s0001g08650 N 0.814