CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI06G01060
(
Oryza meridionalis
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
OMERI06G01060
T351059_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtGRF6
M02545_2.00
Arabidopsis thaliana
NNNNYDNN
NNHRNNNN
PBM
Weirauch et al.(2014)
pTH7356
0.791
0.791
AtGRF6
M07369_2.00
Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN
Dap-seq
OMalley et al.(2016)
AtGRF6_col_a
0.791
0.791
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI06G01060.1
WRC
99
141
PEPWRCRRTDGKKWRCSKEAHPDSKYCERHMHRGRNRSRKPVE
Links
Other
WRC
family TFs
Other
Oryza meridionalis
TFs
593 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
JAAARDRAFT_460099
Jaapia argillacea
JAAARDRAFT_460099
N
0.000
MAM_05902
Metarhizium album
MAM_05902
N
0.000
S40285_05706
Stachybotrys chlorohalonata
S40285_05706
N
0.000