CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc10g080530.1
(
Solanum lycopersicum
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
Solyc10g080530.1
T351296_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42040
M01088_2.00
Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN
PBM
Sullivan et al.(2014)
pTH7503
0.884
0.884
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc10g080530.1.1
WRC
199
241
LEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSTT
Links
Other
WRC
family TFs
Other
Solanum lycopersicum
TFs
94 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL010031
Aedes aegypti
AAEL010031
I
AALB007560
Anopheles albimanus
AALB007560
I
AALB007822
Anopheles albimanus
AALB007822
I
Aan_R009769
Calypte anna
Aan_R009769
I
AARA007787
Anopheles arabiensis
AARA007787
I
AATE012411
Anopheles atroparvus
AATE012411
I
ACEP13483
Atta cephalotes
ACEP13483
I
ACHR000018
Anopheles christyi
ACHR000018
I
ACOM025280
Anopheles coluzzii
ACOM025280
I
ACUA017871
Anopheles culicifacies
ACUA017871
I
ACYPI002601
Acyrthosiphon pisum
ACYPI002601
I
ADIR008037
Anopheles dirus
ADIR008037
I
AEPI000467
Anopheles epiroticus
AEPI000467
I
Afo_R014913
Aptenodytes forsteri
Afo_R014913
I
AFUN008043
Anopheles funestus
AFUN008043
I
AGAP007124
Anopheles gambiae
AGAP007124
I
Alligator_sinensis_CCG001917.1
Alligator sinensis
Alligator_sinensis_CCG001917.1
I
AMAM016192
Anopheles maculatus
AMAM016192
I
AMEC000644
Anopheles melas
AMEC000644
I
AMEM011707
Anopheles merus
AMEM011707
I
AMIN011264
Anopheles minimus
AMIN011264
I
AQUA002051
Anopheles quadriannulatus
AQUA002051
I
ASTEI06898
Anopheles stephensi
ASTEI06898
I
A_02746
Schistosoma haematobium
A_02746
I
BGIBMGA012033
Bombyx mori
BGIBMGA012033
I
BGLB011346
Biomphalaria glabrata
BGLB011346
I
Brh_R005605
Buceros rhinoceros
Brh_R005605
I
CapteG80741
Capitella teleta
CapteG80741
I
Cflo_04912--XP_001121050.1_APIME
Camponotus floridanus
Cflo_04912--XP_001121050.1_APIME
I
CGI_10026944
Crassostrea gigas
CGI_10026944
I
CLEC012607
Cimex lectularius
CLEC012607
I
CPIJ016930
Culex quinquefasciatus
CPIJ016930
I
CpipJ_CPIJ016930
Culex pipiens
CpipJ_CPIJ016930
I
csin111822
Clonorchis sinensis
csin111822
I
D915_08809
Fasciola hepatica
D915_08809
I
DAPPUDRAFT_37461
Daphnia pulex
DAPPUDRAFT_37461
I
ECANG7_04949
Echinococcus canadensis
ECANG7_04949
I
EmuJ_000624300
Echinococcus multilocularis
EmuJ_000624300
I
TCF21
Anolis carolinensis
ENSACAG00000010325
I
MSC
Anolis carolinensis
ENSACAG00000014585
I
ENSAMEG00000005942
Ailuropoda melanoleuca
ENSAMEG00000005942
I
ENSAMEG00000015953
Ailuropoda melanoleuca
ENSAMEG00000015953
I
ENSAMXG00000000487
Astyanax mexicanus
ENSAMXG00000000487
I
ENSAMXG00000004351
Astyanax mexicanus
ENSAMXG00000004351
I
ENSAPLG00000008024
Anas platyrhynchos
ENSAPLG00000008024
I
MSC
Bos taurus
ENSBTAG00000005404
I
TCF21
Bos taurus
ENSBTAG00000021827
I
ENSBTAP00000044112-D1
Bos grunniens
ENSBTAP00000044112-D1
I
ENSBTAP00000052463-D1
Bos grunniens
ENSBTAP00000052463-D1
I
TCF21
Canis familiaris
ENSCAFG00000000205
I
MSC
Canis familiaris
ENSCAFG00000007923
I
TCF21
Callithrix jacchus
ENSCJAG00000002811
I
MSC
Callithrix jacchus
ENSCJAG00000007766
I
ENSCPOG00000004726
Cavia porcellus
ENSCPOG00000004726
I
TCF21
Cavia porcellus
ENSCPOG00000024201
I
ENSCSAG00000013709
Chlorocebus sabaeus
ENSCSAG00000013709
I
ENSCSAG00000016705
Chlorocebus sabaeus
ENSCSAG00000016705
I
tcf21
Danio rerio
ENSDARG00000036869
I
msc
Danio rerio
ENSDARG00000045353
I
MSC
Dasypus novemcinctus
ENSDNOG00000019019
I
TCF21
Dasypus novemcinctus
ENSDNOG00000042846
I
MSC
Equus caballus
ENSECAG00000008333
I
TCF21
Equus caballus
ENSECAG00000019197
I
MSC
Erinaceus europaeus
ENSEEUG00000005021
I
TCF21
Echinops telfairi
ENSETEG00000012492
I
ENSFALG00000008455
Ficedula albicollis
ENSFALG00000008455
I
ENSFALG00000011861
Ficedula albicollis
ENSFALG00000011861
I
TCF21
Felis catus
ENSFCAG00000031261
I
TCF21
Homo sapiens
ENSG00000118526
D
MSC
Homo sapiens
ENSG00000178860
D
msc
Gasterosteus aculeatus
ENSGACG00000002802
I
tcf21
Gasterosteus aculeatus
ENSGACG00000010957
I
ENSGALG00000019470
Gallus gallus
ENSGALG00000019470
I
TCF21
Gallus gallus
ENSGALG00000029024
I
TCF21
Gorilla gorilla
ENSGGOG00000005460
I
MSC
Gorilla gorilla
ENSGGOG00000009955
I
ENSGMOG00000019481
Gadus morhua
ENSGMOG00000019481
I
ENSLACG00000005024
Latimeria chalumnae
ENSLACG00000005024
I
ENSLACG00000014348
Latimeria chalumnae
ENSLACG00000014348
I
MSC
Loxodonta africana
ENSLAFG00000002649
I
TCF21
Loxodonta africana
ENSLAFG00000009507
I
ENSLOCG00000003912
Lepisosteus oculatus
ENSLOCG00000003912
I
ENSLOCG00000016232
Lepisosteus oculatus
ENSLOCG00000016232
I
ENSMEUG00000005491
Macropus eugenii
ENSMEUG00000005491
I
TCF21
Meleagris gallopavo
ENSMGAG00000013117
I
ENSMICG00000014144
Microcebus murinus
ENSMICG00000014144
I
MSC
Myotis lucifugus
ENSMLUG00000008572
I
TCF21
Myotis lucifugus
ENSMLUG00000009194
I
MSC
Macaca mulatta
ENSMMUG00000000947
I
TCF21
Macaca mulatta
ENSMMUG00000002871
I
MSC
Monodelphis domestica
ENSMODG00000007225
I
TCF21
Monodelphis domestica
ENSMODG00000017516
I
ENSMPUG00000010593
Mustela putorius furo
ENSMPUG00000010593
I
ENSMPUG00000014798
Mustela putorius furo
ENSMPUG00000014798
I
Msc
Mus musculus
ENSMUSG00000025930
D
Tcf21
Mus musculus
ENSMUSG00000045680
D
ENSNLEG00000011452
Nomascus leucogenys
ENSNLEG00000011452
I
ENSNLEG00000014647
Nomascus leucogenys
ENSNLEG00000014647
I
TCF21
Ornithorhynchus anatinus
ENSOANG00000013098
I
ENSOARG00000004844
Ovis aries
ENSOARG00000004844
I
ENSOARG00000014623
Ovis aries
ENSOARG00000014623
I
MSC
Oryctolagus cuniculus
ENSOCUG00000007208
I
TCF21
Oryctolagus cuniculus
ENSOCUG00000017761
I
MSC
Otolemur garnettii
ENSOGAG00000013827
I
TCF21
Otolemur garnettii
ENSOGAG00000034073
I
ENSONIG00000000446
Oreochromis niloticus
ENSONIG00000000446
I
ENSONIG00000014278
Oreochromis niloticus
ENSONIG00000014278
I
msc
Oryzias latipes
ENSORLG00000008030
I
tcf21
Oryzias latipes
ENSORLG00000016491
I
ENSP00000321445
Macaca fascicularis
ENSP00000321445
I
ENSP00000356857
Macaca fascicularis
ENSP00000356857
I
ENSPANG00000022301
Papio anubis
ENSPANG00000022301
I
ENSPANG00000024238
Papio anubis
ENSPANG00000024238
I
MSC
Procavia capensis
ENSPCAG00000004330
I
ENSPFOG00000010821
Poecilia formosa
ENSPFOG00000010821
I
ENSPFOG00000020725
Poecilia formosa
ENSPFOG00000020725
I
ENSPMAG00000000379
Petromyzon marinus
ENSPMAG00000000379
I
ENSPPYG00000017022
Pongo abelii
ENSPPYG00000017022
I
ENSPPYG00000018665
Pongo abelii
ENSPPYG00000018665
I
ENSPSIG00000003604
Pelodiscus sinensis
ENSPSIG00000003604
I
TCF21
Pan troglodytes
ENSPTRG00000018622
I
MSC
Pan troglodytes
ENSPTRG00000020339
I
MSC
Pteropus vampyrus
ENSPVAG00000009083
I
TCF21
Pteropus vampyrus
ENSPVAG00000009085
I
Msc
Rattus norvegicus
ENSRNOG00000007540
I
Tcf21
Rattus norvegicus
ENSRNOG00000016700
I
ENSSHAG00000002801
Sarcophilus harrisii
ENSSHAG00000002801
I
ENSSHAG00000004870
Sarcophilus harrisii
ENSSHAG00000004870
I
ENSSSCG00000004174
Sus scrofa
ENSSSCG00000004174
I
MSC
Sus scrofa
ENSSSCG00000006187
I
ENSSTOG00000023733
Ictidomys tridecemlineatus
ENSSTOG00000023733
I
ENSSTOG00000024832
Ictidomys tridecemlineatus
ENSSTOG00000024832
I
MSC
Tupaia belangeri
ENSTBEG00000014659
I
MSC
Taeniopygia guttata
ENSTGUG00000011502
I
TCF21
Taeniopygia guttata
ENSTGUG00000011548
I
msc
Tetraodon nigroviridis
ENSTNIG00000008188
I
tcf21
Tetraodon nigroviridis
ENSTNIG00000016326
I
tcf21
Takifugu rubripes
ENSTRUG00000003919
I
msc
Takifugu rubripes
ENSTRUG00000012425
I
TCF21
Tursiops truncatus
ENSTTRG00000009645
I
MSC
Tursiops truncatus
ENSTTRG00000017260
I
MSC
Vicugna pacos
ENSVPAG00000000378
I
TCF21
Vicugna pacos
ENSVPAG00000006271
I
ENSXMAG00000004322
Xiphophorus maculatus
ENSXMAG00000004322
I
ENSXMAG00000010332
Xiphophorus maculatus
ENSXMAG00000010332
I
fgenesh2_pg.scaffold_201000026
Branchiostoma floridae
fgenesh2_pg.scaffold_201000026
I
fgenesh2_pg.scaffold_201000027
Branchiostoma floridae
fgenesh2_pg.scaffold_201000027
I
fgenesh2_pg.scaffold_201000028
Branchiostoma floridae
fgenesh2_pg.scaffold_201000028
I
fgenesh2_pg.scaffold_201000029
Branchiostoma floridae
fgenesh2_pg.scaffold_201000029
I
GB42177
Apis mellifera
GB42177
I
Gfo_R006439
Geospiza fortis
Gfo_R006439
I
gw.912.11.1
Branchiostoma floridae
gw.912.11.1
I
HelroG188977
Helobdella robusta
HelroG188977
I
HHAL000695-PA
Halyomorpha halys
HHAL000695-PA
I
Hsal_01862--XP_001122645.1_APIME
Harpegnathos saltator
Hsal_01862--XP_001122645.1_APIME
I
ISCW019706
Ixodes scapularis
ISCW019706
I
KGM_20305
Danaus plexippus
KGM_20305
I
L798_06836
Zootermopsis nevadensis
L798_06836
I
LDEC005027
Leptinotarsa decemlineata
LDEC005027
I
LLOJ001927
Lutzomyia longipalpis
LLOJ001927
I
LotgiG99224
Lottia gigantea
LotgiG99224
I
MCOS_0000023201
Mesocestoides corti
MCOS_0000023201
I
Myotis_brandtii_TCF21_10035690
Myotis brandtii
Myotis_brandtii_TCF21_10035690
I
Ogr02938
Ophisaurus gracilis
Ogr02938
I
PHUM294350
Pediculus humanus
PHUM294350
I
PPAI008462
Phlebotomus papatasi
PPAI008462
I
RPRC001590
Rhodnius prolixus
RPRC001590
I
Sakowv30031408m.g
Saccoglossus kowalevskii
Sakowv30031408m.g
I
SCUD_0001558401
Schistosoma curassoni
SCUD_0001558401
I
SINV12414
Solenopsis invicta
SINV12414
I
Sjc_0073180
Schistosoma japonicum
Sjc_0073180
I
SMAR006929
Strigamia maritima
SMAR006929
I
Smp_022610
Schistosoma mansoni
Smp_022610
I
SMRZ_0001749101
Schistosoma margrebowiei
SMRZ_0001749101
I
SMTD_0000660301
Schistosoma mattheei
SMTD_0000660301
I
SPU_012008
Strongylocentrotus purpuratus
SPU_012008
I
T265_00953
Opisthorchis viverrini
T265_00953
I
TASK_0000025401
Taenia asiatica
TASK_0000025401
I
TC002349
Tribolium castaneum
TC002349
I
TRE_0000636201
Trichobilharzia regenti
TRE_0000636201
I
TsM_000945000
Taenia solium
TsM_000945000
I
tcf21
Xenopus tropicalis
XB-GENE-484805
I
tcf21.L
Xenopus laevis
XB-GENE-484809
I
msc
Xenopus tropicalis
XB-GENE-978233
I