CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29700.m000761
(
Ricinus communis
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08879 (WRC)
IPR014977
29700.m000761
T351422_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtGRF6
M02545_2.00
Arabidopsis thaliana
NNNNYDNN
NNHRNNNN
PBM
Weirauch et al.(2014)
pTH7356
0.721
0.721
AtGRF6
M07369_2.00
Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN
Dap-seq
OMalley et al.(2016)
AtGRF6_col_a
0.721
0.721
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29700.m000761
WRC
145
187
LEPGRCRRTDGKKWRCSRDAAPDQKYCERHMHRGRPRSRKPVE
Links
Other
WRC
family TFs
Other
Ricinus communis
TFs
597 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_Genewise1.C_42033
Cryphonectria parasitica
estExt_Genewise1.C_42033
N
0.000
FFUJ_12685
Fusarium fujikuroi
FFUJ_12685
N
0.000
LEMA_P031140.1
Leptosphaeria maculans
LEMA_P031140.1
N
0.000
MBM_06569
Marssonina brunnea
MBM_06569
N
0.000
MBR_00024
Metarhizium brunneum
MBR_00024
N
0.000
OIDMADRAFT_159888
Oidiodendron maius
OIDMADRAFT_159888
N
0.000
OIDMADRAFT_172334
Oidiodendron maius
OIDMADRAFT_172334
N
0.000
PCH_Pc22g17120
Penicillium rubens
PCH_Pc22g17120
N
0.000
SNOG_09694
Stagonospora nodorum
SNOG_09694
N
0.000
TSTA_073790
Talaromyces stipitatus
TSTA_073790
N
0.000
U727_00431330101
Penicillium solitum
U727_00431330101
N
0.000
VDAG_07288
Verticillium dahliae
VDAG_07288
N
0.000
VDBG_09138
Verticillium albo atrum
VDBG_09138
N
0.000
VDBG_09138
Verticillium alfalfae
VDBG_09138
N
0.000
X797_009923
Metarhizium robertsii
X797_009923
N
0.000