cassava30116.valid.m1 (Manihot esculenta)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 cassava30116.valid.m1 T351444_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtGRF6
M02545_2.00 		Arabidopsis thaliana
NNNNYDNN
NNHRNNNN		 PBM
Weirauch et al.(2014)
pTH7356 		0.767 0.767
AtGRF6
M07369_2.00 		Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN		 Dap-seq
OMalley et al.(2016)
AtGRF6_col_a 		0.767 0.767
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava30116.valid.m1 WRC 117 159

Links

Other WRC family TFs
Other Manihot esculenta TFs

622 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_pg.scaffold_104000022 Branchiostoma floridae fgenesh2_pg.scaffold_104000022 N
Sakowv30028253m.g Saccoglossus kowalevskii Sakowv30028253m.g I