CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA034611
(
Oryza indica
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
BGIOSGA034611
T352054_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY29
M02558_2.00
Arabidopsis thaliana
NNNGTCHDNN
NNHDGACNNN
PBM
Weirauch et al.(2014)
pTH9604
0.816
0.517
WRKY29
M07410_2.00
Arabidopsis thaliana
HAAAGTCAACK
MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY29_col_a
0.816
0.517
WRKY29
M07411_2.00
Arabidopsis thaliana
HWWAGTCAAMDNN
NNHKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY29_colamp_a
0.816
0.517
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA034611-PA
WRKY
130
191
FDGYQWRKYGQKQIEGAMYPRSYYRCTNSTNQGCLAKKTVQRNGGGGAAGYTVAYISEHTCK
Links
Other
WRKY
family TFs
Other
Oryza indica
TFs
158 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DACRYDRAFT_39315
Dacryopinax sp
DACRYDRAFT_39315
N
EV44_g6044
Erysiphe necator
EV44_g6044
N
fgenesh1_pg.C_scaffold_2000749
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_2000749
N
M378DRAFT_67363
Amanita muscaria
M378DRAFT_67363
N
M407DRAFT_66269
Tulasnella calospora
M407DRAFT_66269
N
MBM_00167
Marssonina brunnea
MBM_00167
N
PILCRDRAFT_148646
Piloderma croceum
PILCRDRAFT_148646
N