CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA11G01240
(
Oryza nivara
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
ONIVA11G01240
T353866_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY62
M02561_2.00
Arabidopsis thaliana
TRGTCAAM
KTTGACYA
PBM
Weirauch et al.(2014)
pTH8246
0.812
0.500
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.808
0.550
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA11G01240.1
WRKY
145
215
YDGHQWRKYGQKHIKNSKHPRSYYRCTYRQEEKCKATKTVQQREDLHHANSYNGDHPIMYTVVYYGQHTCC
ONIVA11G01240.2
WRKY
145
215
YDGHQWRKYGQKHIKNSKHPRSYYRCTYRQEEKCKATKTVQQREDLHHANSYNGDHPIMYTVVYYGQHTCC
Links
Other
WRKY
family TFs
Other
Oryza nivara
TFs
228 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AARA000701
Anopheles arabiensis
AARA000701
N
AATE017212
Anopheles atroparvus
AATE017212
N
ACOM032158
Anopheles coluzzii
ACOM032158
N
ACUA020571
Anopheles culicifacies
ACUA020571
N
ADAC000480
Anopheles darlingi
ADAC000480
N
ADIR001964
Anopheles dirus
ADIR001964
N
AFAF010009
Anopheles farauti
AFAF010009
N
AMAM006124
Anopheles maculatus
AMAM006124
N
AMEC006412
Anopheles melas
AMEC006412
N
AMEM000398
Anopheles merus
AMEM000398
N
AMIN008585
Anopheles minimus
AMIN008585
N
AQUA010121
Anopheles quadriannulatus
AQUA010121
N
ASIS022483
Anopheles sinensis
ASIS022483
N