PGSC0003DMG400005835 (Solanum tuberosum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 PGSC0003DMG400005835 T354243_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY53
M01090_2.00 		Arabidopsis thaliana
RGTCAACNN
NNGTTGACY		 PBM
Sullivan et al.(2014)
pTH8245 		0.848 0.780
WRKY30
M02563_2.00 		Arabidopsis thaliana
RGTCAACNNN
NNNGTTGACY		 PBM
Weirauch et al.(2014)
pTH7611 		0.836 0.695
WRKY30
M07422_2.00 		Arabidopsis thaliana
DAAGTCAACGN
NCGTTGACTTH		 Dap-seq
OMalley et al.(2016)
WRKY30_col_a 		0.836 0.695
WRKY30
M07423_2.00 		Arabidopsis thaliana
NNAAGTCAACGNH
DNCGTTGACTTNN		 Dap-seq
OMalley et al.(2016)
WRKY30_colamp_a 		0.836 0.695
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.822 0.593
WRKY55
M07392_2.00 		Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD		 Dap-seq
OMalley et al.(2016)
WRKY55_col_a 		0.822 0.627
WRKY46
M07395_2.00 		Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY46_col_a 		0.810 0.593
WRKY46
M07396_2.00 		Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD		 Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a 		0.810 0.593
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400014947 WRKY 46 106
PGSC0003DMT400014948 WRKY 133 153
PGSC0003DMT400014949 WRKY 133 193

Links

Other WRKY family TFs
Other Solanum tuberosum TFs

535 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP15405 Atta cephalotes ACEP15405 I
ACOC_0001162801 Angiostrongylus costaricensis ACOC_0001162801 N
ANCCAN_04270 Ancylostoma caninum ANCCAN_04270 N
ANCCEY_06029 Ancylostoma ceylanicum ANCCEY_06029 N
ANCCEY_07283 Ancylostoma ceylanicum ANCCEY_07283 I
ANCDUO_02717 Ancylostoma duodenale ANCDUO_02717 N
D915_00208 Fasciola hepatica D915_00208 I
D917_08051 Trichinella nativa D917_08051 I
DICVIV_06588 Dictyocaulus viviparus DICVIV_06588 N
ECPE_0000534101 Echinostoma caproni ECPE_0000534101 I
tfap2b Danio rerio ENSDARG00000012667 I
ENSETEG00000009017 Echinops telfairi ENSETEG00000009017 I
TFAP2A Homo sapiens ENSG00000137203 D
ENSGACG00000002672 Gasterosteus aculeatus ENSGACG00000002672 I
ENSGMOG00000009513 Gadus morhua ENSGMOG00000009513 I
ENSMEUG00000007703 Macropus eugenii ENSMEUG00000007703 I
TFAP2D Microcebus murinus ENSMICG00000005507 I
ENSPCAG00000015999 Procavia capensis ENSPCAG00000015999 I
ENSSARG00000001996 Sorex araneus ENSSARG00000001996 I
GPLIN_001548200 Globodera pallida GPLIN_001548200 I
Hba_07416 Heterorhabditis bacteriophora Hba_07416 I
HCOI00642600 Haemonchus contortus HCOI00642600 N
HPLM_0001885301 Haemonchus placei HPLM_0001885301 N
MCINX002204 Melitaea cinxia MCINX002204 I
nAv.1.0.1.g06665 Acanthocheilonema viteae nAv.1.0.1.g06665 I
NBR_0000790901 Nippostrongylus brasiliensis NBR_0000790901 N
NECAME_07951 Necator americanus NECAME_07951 N
nOo.2.0.1.g09186 Onchocerca ochengi nOo.2.0.1.g09186 I
OESDEN_04966 Oesophagostomum dentatum OESDEN_04966 N
OFLC_0000811001 Onchocerca flexuosa OFLC_0000811001 I
PEQ_0000626601 Parascaris equorum PEQ_0000626601 I
PPA19579 Pristionchus pacificus PPA19579 I
Sakowv30010957m.g Saccoglossus kowalevskii Sakowv30010957m.g I
Sjc_0121700 Schistosoma japonicum Sjc_0121700 I
snap_masked-nMf.1.1.scaf31395-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf31395-processed-gene-0.2 I
SPER_0000909201 Spirometra erinaceieuropaei SPER_0000909201 I
SVUK_0000972601 Strongylus vulgaris SVUK_0000972601 N
TELCIR_13120 Teladorsagia circumcincta TELCIR_13120 N
TELCIR_24906 Teladorsagia circumcincta TELCIR_24906 I