CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_09495
(
Cicer arietinum
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
Ca_09495
T355240_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.830
0.661
WRKY55
M07392_2.00
Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD
Dap-seq
OMalley et al.(2016)
WRKY55_col_a
0.811
0.542
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_09495
WRKY
126
186
EDGHQWRKYGQKKILHNDFPRNYFRCTHKHDQGCKATKQVQKIREEPPLHKTTYYGHHTCK
Links
Other
WRKY
family TFs
Other
Cicer arietinum
TFs
308 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA005293
Oryza indica
BGIOSGA005293
N
BRADI1G29920
Brachypodium distachyon
BRADI1G29920
N
BRADI3G60870
Brachypodium distachyon
BRADI3G60870
N
GRMZM2G073892
Zea mays
GRMZM2G073892
N
GRMZM2G402862
Zea mays
GRMZM2G402862
N
LPERR02G31960
Leersia perrieri
LPERR02G31960
N
MLOC_14243
Hordeum vulgare
MLOC_14243
N
OB02G45490
Oryza brachyantha
OB02G45490
N
OGLUM02G39710
Oryza glumaepatula
OGLUM02G39710
N
OMERI02G36320
Oryza meridionalis
OMERI02G36320
N
ONIVA02G41380
Oryza nivara
ONIVA02G41380
N
OPUNC02G35740
Oryza punctata
OPUNC02G35740
N
ORGLA02G0337900
Oryza glaberrima
ORGLA02G0337900
N
ORUFI02G40230
Oryza rufipogon
ORUFI02G40230
N
OS02G0833600
Oryza sativa
OS02G0833600
N
Pavir.J00689
Panicum virgatum
Pavir.J00689
N
Pavir.J01346
Panicum virgatum
Pavir.J01346
N
Pavir.J04759
Panicum virgatum
Pavir.J04759
N
Sb04g038600
Sorghum bicolor
Sb04g038600
N
Sb10g030400
Sorghum bicolor
Sb10g030400
N
Si007412m.g
Setaria italica
Si007412m.g
N
Si023448m.g
Setaria italica
Si023448m.g
N
Traes_7DL_EECCC4DBF
Triticum aestivum
Traes_7DL_EECCC4DBF
N