CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Bostr.25542s0130 *(Boechera stricta)* WRKY
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF03106 (WRKY)	IPR003657	Bostr.25542s0130	T355822_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
WRKY12 M00898_2.00	Arabidopsis thaliana	NHGGTCAACNN	NNGTTGACCDN	PBM Franco-Zorrilla et al.(2014) WRKY12	0.855	0.810
WRKY71 M07374_2.00	Arabidopsis thaliana	HAAAGTCAAMN	NKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY71_col_a	0.829	0.724
WRKY28 M07406_2.00	Arabidopsis thaliana	HAAAGTCAAMNNH	DNNKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY28_col_a	0.828	0.724
WRKY28 M07407_2.00	Arabidopsis thaliana	VAAAGTCAAMG	CKTTGACTTTB	Dap-seq OMalley et al.(2016) WRKY28_colamp_a	0.828	0.724
WRKY8 M02564_2.00	Arabidopsis thaliana	NRGTCAAHN	NDTTGACYN	PBM Weirauch et al.(2014) pTH7554	0.828	0.707
WRKY8 M07428_2.00	Arabidopsis thaliana	NAAAAGTCAACRNHW	WDNYGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY8_colamp_a	0.828	0.707
WRKY8 M07429_2.00	Arabidopsis thaliana	NNVAAAGTCAACRNH	DNYGTTGACTTTBNN	Dap-seq OMalley et al.(2016) WRKY8_col	0.828	0.707
WRKY57 M02547_2.00	Arabidopsis thaliana	NNRGTCAAHN	NDTTGACYNN	PBM Weirauch et al.(2014) pTH7917	0.825	0.724
WRKY24 M07426_2.00	Arabidopsis thaliana	NNNAWAGTCAACGN	NCGTTGACTWTNNN	Dap-seq OMalley et al.(2016) WRKY24_col_a	0.824	0.707
WRKY24 M07427_2.00	Arabidopsis thaliana	NAWAGTCAACGNH	DNCGTTGACTWTN	Dap-seq OMalley et al.(2016) WRKY24_colamp_a	0.824	0.707
WRKY48 M02565_2.00	Arabidopsis thaliana	NNVGTCADNN	NNHTGACBNN	PBM Weirauch et al.(2014) pTH7552	0.824	0.724
WRKY23 M02556_2.00	Arabidopsis thaliana	RGTCAACG	CGTTGACY	PBM Weirauch et al.(2014) pTH7387	0.821	0.690
WRKY23 M01089_2.00	Arabidopsis thaliana	NRGTCAAM	KTTGACYN	PBM Sullivan et al.(2014) pTH7671	0.821	0.690
WRKY75 M02562_2.00	Arabidopsis thaliana	NRGTCAAM	KTTGACYN	PBM Weirauch et al.(2014) pTH8821	0.818	0.672
WRKY75 M07420_2.00	Arabidopsis thaliana	NAAAGTCAACGNH	DNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY75_col_a	0.818	0.672
WRKY75 M07421_2.00	Arabidopsis thaliana	VAAAGTCAACRNH	DNYGTTGACTTTB	Dap-seq OMalley et al.(2016) WRKY75_colamp_a	0.818	0.672
WRKY43 M02555_2.00	Arabidopsis thaliana	NRGTCAAHNN	NNDTTGACYN	PBM Weirauch et al.(2014) pTH7373	0.818	0.672
WRKY43 M07393_2.00	Arabidopsis thaliana	NNAAAGTCAACGNN	NNCGTTGACTTTNN	Dap-seq OMalley et al.(2016) WRKY43_col_a	0.818	0.672
WRKY43 M07394_2.00	Arabidopsis thaliana	NNNNAAAGTCAACGN	NCGTTGACTTTNNNN	Dap-seq OMalley et al.(2016) WRKY43_colamp_a	0.818	0.672
WRKY50 M07424_2.00	Arabidopsis thaliana	NNAAAAGTCAAMN	NKTTGACTTTTNN	Dap-seq OMalley et al.(2016) WRKY50_col_a	0.818	0.690
WRKY50 M07425_2.00	Arabidopsis thaliana	NWAAGTCAANN	NNTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY50_colamp_a	0.818	0.690
ZAP1 M00982_2.00	Arabidopsis thaliana	NRGTCAAN	NTTGACYN	PBM Lindemose et al.(2014) WRKY1	0.818	0.621
Q40828_PETCR M11467_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY_Q2	0.816	0.552
WRKY11 M02559_2.00	Arabidopsis thaliana	NDGTCAAHNN	NNDTTGACHN	PBM Weirauch et al.(2014) pTH8091	0.815	0.552
WRKY11 M07415_2.00	Arabidopsis thaliana	NHAAAGTCAACBNH	DNVGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY11_col_a	0.815	0.552
WRKY11 M11464_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY11_Q2	0.815	0.552
WRKY15 M02549_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Weirauch et al.(2014) pTH7602	0.813	0.569
WRKY15 M07383_2.00	Arabidopsis thaliana	AAAAGTCAACKN	NMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY15_colamp_a	0.813	0.569
WRKY15 M07384_2.00	Arabidopsis thaliana	NWAAGTCAACB	VGTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY15_col_b	0.813	0.569
WRKY45 M00899_2.00	Arabidopsis thaliana	NNRGTCAAMGN	NCKTTGACYNN	PBM Franco-Zorrilla et al.(2014) WRKY45	0.809	0.638
WRKY45 M07397_2.00	Arabidopsis thaliana	NAAAAGTCAAMD	HKTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY45_col_a	0.809	0.638
WRKY45 M07398_2.00	Arabidopsis thaliana	MAAAGTCAAMV	BKTTGACTTTK	Dap-seq OMalley et al.(2016) WRKY45_colamp_a	0.809	0.638
WRKY17 M02550_2.00	Arabidopsis thaliana	NNDGTCAAHN	NDTTGACHNN	PBM Weirauch et al.(2014) pTH8088	0.809	0.534
WRKY17 M07385_2.00	Arabidopsis thaliana	NHAAAGTCAACRNN	NNYGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY17_col_a	0.809	0.534
WRKY17 M07386_2.00	Arabidopsis thaliana	NMAAAGTCAACGN	NCGTTGACTTTKN	Dap-seq OMalley et al.(2016) WRKY17_colamp_a	0.809	0.534
For this family, TFs with SR scores > 0.808* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Bostr.25542s0130.1.p	WRKY	221	278	DDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCRVKKRVERLADDPRMVITTYEGRHLHS

Links
Other WRKY family TFs
Other *Boechera stricta* TFs

1233 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ACRE_079180	Acremonium chrysogenum	ACRE_079180	I
BBA_04449	Beauveria bassiana	BBA_04449	I
Bcin07g02960	Botrytis cinerea	Bcin07g02960	I
BOTBODRAFT_92498	Botryobasidium botryosum	BOTBODRAFT_92498	I
CCM_07005	Cordyceps militaris	CCM_07005	I
CFIO01_10932	Colletotrichum fioriniae	CFIO01_10932	I
CGGC5_4872	Colletotrichum gloeosporioides	CGGC5_4872	I
CH063_09324	Colletotrichum higginsianum	CH063_09324	I
CHGG_05891	Chaetomium globosum	CHGG_05891	I
CMQ_8013	Grosmannia clavigera	CMQ_8013	I
Cob_08105	Colletotrichum orbiculare	Cob_08105	I
CPUR_03253	Claviceps purpurea	CPUR_03253	I
CSUB01_03838	Colletotrichum sublineola	CSUB01_03838	I
CTHT_0009000	Chaetomium thermophilum	CTHT_0009000	I
estExt_fgenesh1_pm.C_140003	Cryphonectria parasitica	estExt_fgenesh1_pm.C_140003	I
estExt_Genewise1.C_40527	Neurospora discreta	estExt_Genewise1.C_40527	I
F503_01009	Ophiostoma piceae uamh	F503_01009	I
FFUJ_01365	Fusarium fujikuroi	FFUJ_01365	I
FGRRES_15831	Fusarium graminearum	FGRRES_15831	I
FOXG_00218	Fusarium oxysporum	FOXG_00218	I
FPSE_02604	Fusarium pseudograminearum	FPSE_02604	I
FVEG_01300	Fusarium verticillioides	FVEG_01300	I
GGTG_04163	Gaeumannomyces graminis	GGTG_04163	I
GLRG_04053	Colletotrichum graminicola	GLRG_04053	I
HMPREF1624_03694	Sporothrix schenckii	HMPREF1624_03694	I
MAC_04202	Metarhizium acridum	MAC_04202	I
MAJ_02156	Metarhizium majus	MAJ_02156	I
MAM_07644	Metarhizium album	MAM_07644	I
MANI_024675	Metarhizium anisopliae	MANI_024675	I
MAPG_00558	Magnaporthe poae	MAPG_00558	I
MGG_10837	Magnaporthe oryzae	MGG_10837	I
MGU_04823	Metarhizium guizhouense	MGU_04823	I
MYCTH_2296905	Myceliophthora thermophila	MYCTH_2296905	I
NCU02957	Neurospora crassa	NCU02957	D
NEUTE1DRAFT_150703	Neurospora tetrasperma	NEUTE1DRAFT_150703	I
OIDMADRAFT_110480	Oidiodendron maius	OIDMADRAFT_110480	I
OIDMADRAFT_57256	Oidiodendron maius	OIDMADRAFT_57256	I
PFICI_01786	Pestalotiopsis fici	PFICI_01786	I
PODANS_1_18420	Podospora anserina	PODANS_1_18420	I
S40285_00887	Stachybotrys chlorohalonata	S40285_00887	I
S40288_08146	Stachybotrys chartarum	S40288_08146	I
SAPIO_CDS5040	Scedosporium apiospermum	SAPIO_CDS5040	I
SBOR_5241	Sclerotinia borealis	SBOR_5241	I
SMAC_00493	Sordaria macrospora	SMAC_00493	I
SPBR_01576	Sporothrix brasiliensis	SPBR_01576	I
SS1G_01995	Sclerotinia sclerotiorum	SS1G_01995	I
THITE_2112332	Thielavia terrestris	THITE_2112332	I
TRIATDRAFT_299973	Trichoderma atroviride	TRIATDRAFT_299973	I
TRIREDRAFT_122371	Trichoderma reesei	TRIREDRAFT_122371	I
TRIVIDRAFT_35604	Trichoderma virens	TRIVIDRAFT_35604	I
UV8b_5697	Ustilaginoidea virens	UV8b_5697	I
VDAG_03292	Verticillium dahliae	VDAG_03292	I
VDBG_06134	Verticillium alfalfae	VDBG_06134	I
VDBG_06134	Verticillium albo atrum	VDBG_06134	I
VHEMI06417	Torrubiella hemipterigena	VHEMI06417	I
X797_003690	Metarhizium robertsii	X797_003690	I

Bostr.25542s0130 (Boechera stricta) WRKY

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1233 Related TFs

Bostr.25542s0130 **(Boechera stricta)
WRKY**