Gorai.007G171900 (Gossypium raimondii)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Gorai.007G171900 T356302_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY42
M07404_2.00 		Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN
NNDNNHNNNNHGTTGACYWHN		 Dap-seq
OMalley et al.(2016)
WRKY42_col_a 		0.900 0.966
WRKY42
M07405_2.00 		Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD
HHNDNMGTTGACYWNNNHND		 Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a 		0.900 0.966
WRKY31
M07408_2.00 		Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG
CGTTGACYHNNNNNDNNNN		 Dap-seq
OMalley et al.(2016)
WRKY31_col_a 		0.897 0.949
WRKY31
M07409_2.00 		Arabidopsis thaliana
NHWRGTCAACKNH
DNMGTTGACYWDN		 Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a 		0.897 0.949
WRKY6
M07377_2.00 		Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG
CGTTGACYNDNDHNDNNNH		 Dap-seq
OMalley et al.(2016)
WRKY6_col_a 		0.897 0.949
WRKY6
M07378_2.00 		Arabidopsis thaliana
NNHNWRGTCAACKNH
DNMGTTGACYWNDNN		 Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a 		0.897 0.949
WRKY47
M00732_2.00 		Arabidopsis thaliana
NNRGTCAACKN
NMGTTGACYNN		 PBM
Chang et al.(2013)
pTH7913 		0.895 0.932
WRKY47
M07402_2.00 		Arabidopsis thaliana
WRGTCAAMGNHVDK
MHBDNCKTTGACYW		 Dap-seq
OMalley et al.(2016)
WRKY47_col_a 		0.895 0.932
WRKY47
M07403_2.00 		Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN
NNNNDNMGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a 		0.895 0.932
WRKY21
M02553_2.00 		Arabidopsis thaliana
NNRGTCAAMN
NKTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7422 		0.809 0.593
WRKY21
M07389_2.00 		Arabidopsis thaliana
HAAAGTCAACNNH
DNNGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a 		0.809 0.593
WRKY21
M07390_2.00 		Arabidopsis thaliana
HAAAGTCAACK
MGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY21_col 		0.809 0.593
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G171900.1 WRKY 251 309

Links

Other WRKY family TFs
Other Gossypium raimondii TFs

670 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0523s0090 Salix purpurea SapurV1A.0523s0090 N
SapurV1A.0523s0270 Salix purpurea SapurV1A.0523s0270 N
SapurV1A.0618s0180 Salix purpurea SapurV1A.0618s0180 N
SapurV1A.1383s0100 Salix purpurea SapurV1A.1383s0100 N