Lus10038028.g (Linum usitatissimum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Lus10038028.g T356466_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY42
M07404_2.00 		Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN
NNDNNHNNNNHGTTGACYWHN		 Dap-seq
OMalley et al.(2016)
WRKY42_col_a 		0.884 0.915
WRKY42
M07405_2.00 		Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD
HHNDNMGTTGACYWNNNHND		 Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a 		0.884 0.915
WRKY47
M00732_2.00 		Arabidopsis thaliana
NNRGTCAACKN
NMGTTGACYNN		 PBM
Chang et al.(2013)
pTH7913 		0.880 0.881
WRKY47
M07402_2.00 		Arabidopsis thaliana
WRGTCAAMGNHVDK
MHBDNCKTTGACYW		 Dap-seq
OMalley et al.(2016)
WRKY47_col_a 		0.880 0.881
WRKY47
M07403_2.00 		Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN
NNNNDNMGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a 		0.880 0.881
WRKY6
M07377_2.00 		Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG
CGTTGACYNDNDHNDNNNH		 Dap-seq
OMalley et al.(2016)
WRKY6_col_a 		0.879 0.915
WRKY6
M07378_2.00 		Arabidopsis thaliana
NNHNWRGTCAACKNH
DNMGTTGACYWNDNN		 Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a 		0.879 0.915
WRKY31
M07408_2.00 		Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG
CGTTGACYHNNNNNDNNNN		 Dap-seq
OMalley et al.(2016)
WRKY31_col_a 		0.875 0.915
WRKY31
M07409_2.00 		Arabidopsis thaliana
NHWRGTCAACKNH
DNMGTTGACYWDN		 Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a 		0.875 0.915
WRKY40
M02548_2.00 		Arabidopsis thaliana
NRGTCAWN
NWTGACYN		 PBM
Weirauch et al.(2014)
pTH8398 		0.811 0.610
WRKY40
M07379_2.00 		Arabidopsis thaliana
NNNAAAGTCAAVR
YBTTGACTTTNNN		 Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a 		0.811 0.610
WRKY40
M07380_2.00 		Arabidopsis thaliana
NNVAAAGTCAAVRNH
DNYBTTGACTTTBNN		 Dap-seq
OMalley et al.(2016)
WRKY40_col 		0.811 0.610
WRKY40
M08180_2.00 		Arabidopsis thaliana
NNAGTCAANN
NNTTGACTNN		 ChIP-seq
Mathelier et al.(2014)
MA1085.2 		0.811 0.610
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10038028 WRKY 202 260

Links

Other WRKY family TFs
Other Linum usitatissimum TFs

676 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R015370 Calypte anna Aan_R015370 I
Afo_R015728 Aptenodytes forsteri Afo_R015728 I
Alligator_sinensis_CCG003524.1 Alligator sinensis Alligator_sinensis_CCG003524.1 I
Brh_R011889 Buceros rhinoceros Brh_R011889 I
Cmyd_10010643 Chelonia mydas Cmyd_10010643 I
ENSAMEG00000001062 Ailuropoda melanoleuca ENSAMEG00000001062 I
ENSAPLG00000009825 Anas platyrhynchos ENSAPLG00000009825 I
ENSBTAG00000023372 Bos taurus ENSBTAG00000023372 I
ENSCAFG00000003715 Canis familiaris ENSCAFG00000003715 I
MYCN Cavia porcellus ENSCPOG00000020263 I
ENSCSAG00000007889 Chlorocebus sabaeus ENSCSAG00000007889 I
MYCN Dasypus novemcinctus ENSDNOG00000047342 I
Mycn Dipodomys ordii ENSDORG00000009906 I
ENSECAG00000002896 Equus caballus ENSECAG00000002896 I
ENSETEG00000007657 Echinops telfairi ENSETEG00000007657 I
ENSFALG00000008694 Ficedula albicollis ENSFALG00000008694 I
ENSFCAG00000022893 Felis catus ENSFCAG00000022893 I
MYCN Homo sapiens ENSG00000134323 D
MYCN Gallus gallus ENSGALG00000016462 I
MYCN Gorilla gorilla ENSGGOG00000005130 I
ENSLACG00000008338 Latimeria chalumnae ENSLACG00000008338 I
MYCN Loxodonta africana ENSLAFG00000015181 I
ENSMEUG00000006154 Macropus eugenii ENSMEUG00000006154 I
ENSMGAG00000015965 Meleagris gallopavo ENSMGAG00000015965 I
MYCN Microcebus murinus ENSMICG00000013903 I
ENSMLUG00000026821 Myotis lucifugus ENSMLUG00000026821 I
ENSMMUG00000018805 Macaca mulatta ENSMMUG00000018805 I
ENSMMUP00000024750 Macaca fascicularis ENSMMUP00000024750 I
ENSMPUG00000013620 Mustela putorius furo ENSMPUG00000013620 I
Mycn Mus musculus ENSMUSG00000037169 D
ENSNLEG00000014496 Nomascus leucogenys ENSNLEG00000014496 I
MYCN Ornithorhynchus anatinus ENSOANG00000012832 I
ENSOARG00000016462 Ovis aries ENSOARG00000016462 I
ENSOCUG00000026053 Oryctolagus cuniculus ENSOCUG00000026053 I
MYCN Otolemur garnettii ENSOGAG00000010927 I
MYCN Ochotona princeps ENSOPRG00000004369 I
ENSP00000281043-D1 Bos grunniens ENSP00000281043-D1 I
ENSPANG00000019058 Papio anubis ENSPANG00000019058 I
ENSPPYG00000012635 Pongo abelii ENSPPYG00000012635 I
ENSPSIG00000012289 Pelodiscus sinensis ENSPSIG00000012289 I
MYCN Pan troglodytes ENSPTRG00000011672 I
MYCN Pteropus vampyrus ENSPVAG00000010355 I
Mycn Rattus norvegicus ENSRNOG00000051372 I
MYCN Sus scrofa ENSSSCG00000008618 I
ENSSTOG00000012252 Ictidomys tridecemlineatus ENSSTOG00000012252 I
ENSSTOG00000021587 Ictidomys tridecemlineatus ENSSTOG00000021587 I
MYCN Taeniopygia guttata ENSTGUG00000013104 I
MYCN Tursiops truncatus ENSTTRG00000005135 I
ENSVPAG00000007723 Vicugna pacos ENSVPAG00000007723 I
Gfo_R015246 Geospiza fortis Gfo_R015246 I
Myotis_brandtii_MYCN_10020172 Myotis brandtii Myotis_brandtii_MYCN_10020172 I
Ogr12112 Ophisaurus gracilis Ogr12112 I
Pvit_07093 Pogona vitticeps Pvit_07093 I
Tal_R000146 Tyto alba Tal_R000146 I